Difference between revisions of "Utilization of specific carbon sources"
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+ | == Genes in this functional category == | ||
+ | |||
+ | === Utilization of organic acids === | ||
+ | * [[acsA]] | ||
+ | * [[acuA]] | ||
+ | * [[acuC]] | ||
+ | * [[cimH]] | ||
+ | * [[citH]] | ||
+ | * [[citM]] | ||
+ | * [[citS]] | ||
+ | * [[citT]] | ||
+ | * [[dctB]] | ||
+ | * [[dctP]] | ||
+ | * [[dctR]] | ||
+ | * [[dctS]] | ||
+ | * [[lutA]] | ||
+ | * [[lutB]] | ||
+ | * [[lutC]] | ||
+ | * [[lutP]] | ||
+ | * [[lutR]] | ||
+ | * [[maeA]] | ||
+ | * [[maeN]] | ||
+ | * [[malK]] | ||
+ | * [[malR]] | ||
+ | * [[malS]] | ||
+ | * [[mleA]] | ||
+ | * [[mleN]] | ||
+ | * [[yflS]] | ||
+ | * [[yoaB]] | ||
+ | * [[yraO]] | ||
+ | * [[ytsJ]] | ||
+ | |||
+ | === Utilization of acetoin === | ||
+ | * [[acoA]] | ||
+ | * [[acoB]] | ||
+ | * [[acoC]] | ||
+ | * [[acoL]] | ||
+ | * [[acoR]] | ||
+ | * [[ytrA]] | ||
+ | * [[ytrB]] | ||
+ | * [[ytrC]] | ||
+ | * [[ytrD]] | ||
+ | * [[ytrE]] | ||
+ | * [[ytrF]] | ||
+ | |||
+ | === Utilization of glycerol/ glycerol-3-phosphate === | ||
+ | * [[glpD]] | ||
+ | * [[glpF]] | ||
+ | * [[glpK]] | ||
+ | * [[glpP]] | ||
+ | * [[glpQ]] | ||
+ | * [[glpT]] | ||
+ | |||
+ | === Utilization of ribose === | ||
+ | * [[rbsA]] | ||
+ | * [[rbsB]] | ||
+ | * [[rbsC]] | ||
+ | * [[rbsD]] | ||
+ | * [[rbsK]] | ||
+ | * [[rbsR]] | ||
+ | |||
+ | === Utilization of xylan/ xylose === | ||
+ | * [[xylA]] | ||
+ | * [[xylB]] | ||
+ | * [[xylR]] | ||
+ | * [[xynA]] | ||
+ | * [[xynB]] | ||
+ | * [[xynP]] | ||
+ | |||
+ | === Utilization of arabinan/ arabinose/ arabitol === | ||
+ | * [[abf2]] | ||
+ | * [[abfA]] | ||
+ | * [[abn2]] | ||
+ | * [[abnA]] | ||
+ | * [[araA]] | ||
+ | * [[araB]] | ||
+ | * [[araD]] | ||
+ | * [[araE]] | ||
+ | * [[araN]] | ||
+ | * [[araP]] | ||
+ | * [[araQ]] | ||
+ | * [[araR]] | ||
+ | * [[ytbE]] | ||
+ | |||
+ | === Utilization of fructose === | ||
+ | * [[fruA]] | ||
+ | * [[fruK]] | ||
+ | * [[fruR]] | ||
+ | * [[levD]] | ||
+ | * [[levE]] | ||
+ | * [[levF]] | ||
+ | * [[levG]] | ||
+ | * [[levR]] | ||
+ | |||
+ | === Utilization of galactose === | ||
+ | * [[galE]] | ||
+ | * [[galK]] | ||
+ | * [[galM]] | ||
+ | * [[galT]] | ||
+ | |||
+ | === Utilization of mannose === | ||
+ | * [[manA]] | ||
+ | * [[manP]] | ||
+ | * [[manR]] | ||
+ | * [[pmi]] | ||
+ | |||
+ | === Utilization of mannitol === | ||
+ | * [[mtlA]] | ||
+ | * [[mtlD]] | ||
+ | * [[mtlF]] | ||
+ | * [[mtlR]] | ||
+ | |||
+ | === Utilization of glucitol === | ||
+ | * [[gutB]] | ||
+ | * [[gutP]] | ||
+ | * [[gutR]] | ||
+ | |||
+ | === Utilization of rhamnose === | ||
+ | * [[yulC]] | ||
+ | * [[yulE]] | ||
+ | |||
+ | === Utilization of gluconate === | ||
+ | * [[gntK]] | ||
+ | * [[gntP]] | ||
+ | * [[gntR]] | ||
+ | * [[gntZ]] | ||
+ | |||
+ | === Utilization of glucarate/galactarate === | ||
+ | * [[ycbC]] | ||
+ | * [[ycbD]] | ||
+ | * [[ycbE]] | ||
+ | * [[ycbF]] | ||
+ | * [[ycbG]] | ||
+ | * [[ycbH]] | ||
+ | |||
+ | === Utilization of hexuronate === | ||
+ | * [[exuR]] | ||
+ | * [[exuT]] | ||
+ | * [[kdgA]] | ||
+ | * [[kdgK]] | ||
+ | * [[kdgR]] | ||
+ | * [[kdgT]] | ||
+ | * [[kduD]] | ||
+ | * [[kduI]] | ||
+ | * [[uxaA]] | ||
+ | * [[uxaB]] | ||
+ | * [[uxaC]] | ||
+ | * [[uxuA]] | ||
+ | * [[yjmB]] | ||
+ | * [[yjmC]] | ||
+ | * [[yjmD]] | ||
+ | * [[yjmF]] | ||
+ | |||
+ | === Utilization of inositol === | ||
+ | * [[iolA]] | ||
+ | * [[iolB]] | ||
+ | * [[iolC]] | ||
+ | * [[iolD]] | ||
+ | * [[iolE]] | ||
+ | * [[iolF]] | ||
+ | * [[iolG]] | ||
+ | * [[iolH]] | ||
+ | * [[iolI]] | ||
+ | * [[iolJ]] | ||
+ | * [[iolR]] | ||
+ | * [[iolS]] | ||
+ | * [[iolT]] | ||
+ | * [[iolW]] | ||
+ | * [[iolX]] | ||
+ | |||
+ | === Utilization of amino sugars === | ||
+ | * [[gamA]] | ||
+ | * [[gamP]] | ||
+ | * [[murP]] | ||
+ | * [[murQ]] | ||
+ | * [[murR]] | ||
+ | * [[nagA]] | ||
+ | * [[nagB]] | ||
+ | * [[nagP]] | ||
+ | * [[ybgA]] | ||
+ | * [[yurJ]] | ||
+ | * [[yurK]] | ||
+ | * [[yurL]] | ||
+ | * [[yurM]] | ||
+ | * [[yurN]] | ||
+ | * [[yurO]] | ||
+ | * [[yurP]] | ||
+ | * [[yvoA]] | ||
+ | |||
+ | === Utilization of beta-glucosides === | ||
+ | * [[bglA]] | ||
+ | * [[bglH]] | ||
+ | * [[bglP]] | ||
+ | * [[licT]] | ||
+ | * [[yckE]] | ||
+ | |||
+ | === Utilization of sucrose === | ||
+ | * [[fruC]] | ||
+ | * [[fruC]] | ||
+ | * [[sacA]] | ||
+ | * [[sacB]] | ||
+ | * [[sacP]] | ||
+ | * [[sacT]] | ||
+ | * [[sacX]] | ||
+ | * [[sacY]] | ||
+ | |||
+ | === Utilization of trehalose === | ||
+ | * [[glcK]] | ||
+ | * [[treA]] | ||
+ | * [[treP]] | ||
+ | * [[treR]] | ||
+ | |||
+ | === Utilization of melibiose === | ||
+ | * [[amyC]] | ||
+ | * [[amyD]] | ||
+ | * [[melA]] | ||
+ | * [[msmE]] | ||
+ | * [[msmR]] | ||
+ | * [[msmX]] | ||
+ | |||
+ | === Utilization of maltose === | ||
+ | * [[glcK]] | ||
+ | * [[glvR]] | ||
+ | * [[malA]] | ||
+ | * [[malP]] | ||
+ | * [[yvdK]] | ||
+ | |||
+ | === Utilization of starch/ maltodextrin === | ||
+ | * [[amyE]] | ||
+ | * [[amyX]] | ||
+ | * [[glcK]] | ||
+ | * [[maa]] | ||
+ | * [[maa]] | ||
+ | * [[malL]] | ||
+ | * [[malL]] | ||
+ | * [[mdxE]] | ||
+ | * [[mdxF]] | ||
+ | * [[mdxG]] | ||
+ | * [[msmX]] | ||
+ | * [[pgcM]] | ||
+ | * [[yvdE]] | ||
+ | * [[yvdF]] | ||
+ | * [[yvdF]] | ||
+ | |||
+ | === Utilization of glucomannan === | ||
+ | * [[gmuA]] | ||
+ | * [[gmuB]] | ||
+ | * [[gmuC]] | ||
+ | * [[gmuD]] | ||
+ | * [[gmuE]] | ||
+ | * [[gmuF]] | ||
+ | * [[gmuG]] | ||
+ | * [[gmuR]] | ||
+ | |||
+ | === Utilization of pectin === | ||
+ | * [[ybcM]] | ||
+ | * [[yesO]] | ||
+ | * [[yesP]] | ||
+ | * [[yesQ]] | ||
+ | * [[yesR]] | ||
+ | * [[yesS]] | ||
+ | * [[yesT]] | ||
+ | * [[yesV]] | ||
+ | * [[yesW]] | ||
+ | * [[yesX]] | ||
+ | * [[yesY]] | ||
+ | * [[yesZ]] | ||
+ | * [[yteR]] | ||
+ | |||
+ | === Utilization of other polymeric carbohydrates === | ||
+ | * [[bglC]] | ||
+ | * [[bglS]] | ||
+ | * [[csn]] | ||
+ | * [[cycB]] | ||
+ | * [[lacA]] | ||
+ | * [[lacR]] | ||
+ | * [[levB]] | ||
+ | * [[levD]] | ||
+ | * [[levE]] | ||
+ | * [[levF]] | ||
+ | * [[levG]] | ||
+ | * [[levR]] | ||
+ | * [[licA]] | ||
+ | * [[licB]] | ||
+ | * [[licC]] | ||
+ | * [[licH]] | ||
+ | * [[licR]] | ||
+ | * [[licT]] | ||
+ | * [[pel]] | ||
+ | * [[pelB]] | ||
+ | * [[pelC]] | ||
+ | * [[sacC]] | ||
+ | * [[senS]] | ||
+ | * [[xynC]] | ||
+ | * [[xynD]] | ||
+ | * [[ysdC]] | ||
+ | * [[ytoP]] | ||
+ | * [[yugT]] | ||
+ | * [[yvfL]] | ||
+ | * [[yvfM]] | ||
+ | * [[yvfO]] |
Revision as of 14:38, 29 November 2010
Parent categories |
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Neighbouring categories |
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Related categories |
none |
Contents
- 1 Genes in this functional category
- 1.1 Utilization of organic acids
- 1.2 Utilization of acetoin
- 1.3 Utilization of glycerol/ glycerol-3-phosphate
- 1.4 Utilization of ribose
- 1.5 Utilization of xylan/ xylose
- 1.6 Utilization of arabinan/ arabinose/ arabitol
- 1.7 Utilization of fructose
- 1.8 Utilization of galactose
- 1.9 Utilization of mannose
- 1.10 Utilization of mannitol
- 1.11 Utilization of glucitol
- 1.12 Utilization of rhamnose
- 1.13 Utilization of gluconate
- 1.14 Utilization of glucarate/galactarate
- 1.15 Utilization of hexuronate
- 1.16 Utilization of inositol
- 1.17 Utilization of amino sugars
- 1.18 Utilization of beta-glucosides
- 1.19 Utilization of sucrose
- 1.20 Utilization of trehalose
- 1.21 Utilization of melibiose
- 1.22 Utilization of maltose
- 1.23 Utilization of starch/ maltodextrin
- 1.24 Utilization of glucomannan
- 1.25 Utilization of pectin
- 1.26 Utilization of other polymeric carbohydrates
Genes in this functional category
Utilization of organic acids
- acsA
- acuA
- acuC
- cimH
- citH
- citM
- citS
- citT
- dctB
- dctP
- dctR
- dctS
- lutA
- lutB
- lutC
- lutP
- lutR
- maeA
- maeN
- malK
- malR
- malS
- mleA
- mleN
- yflS
- yoaB
- yraO
- ytsJ