Difference between revisions of "Utilization of specific carbon sources"

From SubtiWiki
Jump to: navigation, search
(Created page with " {{CategoryTree |Parents= * 2. Metabolism ** 2.2. Carbon metabolism |Neighbours= * 2.2.1. Carbon core metabolism * 2.2.2. Utilization of specific carbon sources |...")
 
Line 10: Line 10:
 
none  
 
none  
 
|}}
 
|}}
 +
 +
== Genes in this functional category ==
 +
 +
=== Utilization of organic acids ===
 +
* [[acsA]]
 +
* [[acuA]]
 +
* [[acuC]]
 +
* [[cimH]]
 +
* [[citH]]
 +
* [[citM]]
 +
* [[citS]]
 +
* [[citT]]
 +
* [[dctB]]
 +
* [[dctP]]
 +
* [[dctR]]
 +
* [[dctS]]
 +
* [[lutA]]
 +
* [[lutB]]
 +
* [[lutC]]
 +
* [[lutP]]
 +
* [[lutR]]
 +
* [[maeA]]
 +
* [[maeN]]
 +
* [[malK]]
 +
* [[malR]]
 +
* [[malS]]
 +
* [[mleA]]
 +
* [[mleN]]
 +
* [[yflS]]
 +
* [[yoaB]]
 +
* [[yraO]]
 +
* [[ytsJ]]
 +
 +
=== Utilization of acetoin ===
 +
* [[acoA]]
 +
* [[acoB]]
 +
* [[acoC]]
 +
* [[acoL]]
 +
* [[acoR]]
 +
* [[ytrA]]
 +
* [[ytrB]]
 +
* [[ytrC]]
 +
* [[ytrD]]
 +
* [[ytrE]]
 +
* [[ytrF]]
 +
 +
=== Utilization of glycerol/ glycerol-3-phosphate ===
 +
* [[glpD]]
 +
* [[glpF]]
 +
* [[glpK]]
 +
* [[glpP]]
 +
* [[glpQ]]
 +
* [[glpT]]
 +
 +
=== Utilization of ribose ===
 +
* [[rbsA]]
 +
* [[rbsB]]
 +
* [[rbsC]]
 +
* [[rbsD]]
 +
* [[rbsK]]
 +
* [[rbsR]]
 +
 +
=== Utilization of xylan/ xylose ===
 +
* [[xylA]]
 +
* [[xylB]]
 +
* [[xylR]]
 +
* [[xynA]]
 +
* [[xynB]]
 +
* [[xynP]]
 +
 +
=== Utilization of arabinan/ arabinose/ arabitol ===
 +
* [[abf2]]
 +
* [[abfA]]
 +
* [[abn2]]
 +
* [[abnA]]
 +
* [[araA]]
 +
* [[araB]]
 +
* [[araD]]
 +
* [[araE]]
 +
* [[araN]]
 +
* [[araP]]
 +
* [[araQ]]
 +
* [[araR]]
 +
* [[ytbE]]
 +
 +
=== Utilization of fructose ===
 +
* [[fruA]]
 +
* [[fruK]]
 +
* [[fruR]]
 +
* [[levD]]
 +
* [[levE]]
 +
* [[levF]]
 +
* [[levG]]
 +
* [[levR]]
 +
 +
=== Utilization of galactose ===
 +
* [[galE]]
 +
* [[galK]]
 +
* [[galM]]
 +
* [[galT]]
 +
 +
=== Utilization of mannose ===
 +
* [[manA]]
 +
* [[manP]]
 +
* [[manR]]
 +
* [[pmi]]
 +
 +
=== Utilization of mannitol ===
 +
* [[mtlA]]
 +
* [[mtlD]]
 +
* [[mtlF]]
 +
* [[mtlR]]
 +
 +
=== Utilization of glucitol ===
 +
* [[gutB]]
 +
* [[gutP]]
 +
* [[gutR]]
 +
 +
=== Utilization of rhamnose ===
 +
* [[yulC]]
 +
* [[yulE]]
 +
 +
=== Utilization of gluconate ===
 +
* [[gntK]]
 +
* [[gntP]]
 +
* [[gntR]]
 +
* [[gntZ]]
 +
 +
=== Utilization of glucarate/galactarate ===
 +
* [[ycbC]]
 +
* [[ycbD]]
 +
* [[ycbE]]
 +
* [[ycbF]]
 +
* [[ycbG]]
 +
* [[ycbH]]
 +
 +
=== Utilization of hexuronate  ===
 +
* [[exuR]]
 +
* [[exuT]]
 +
* [[kdgA]]
 +
* [[kdgK]]
 +
* [[kdgR]]
 +
* [[kdgT]]
 +
* [[kduD]]
 +
* [[kduI]]
 +
* [[uxaA]]
 +
* [[uxaB]]
 +
* [[uxaC]]
 +
* [[uxuA]]
 +
* [[yjmB]]
 +
* [[yjmC]]
 +
* [[yjmD]]
 +
* [[yjmF]]
 +
 +
=== Utilization of inositol ===
 +
* [[iolA]]
 +
* [[iolB]]
 +
* [[iolC]]
 +
* [[iolD]]
 +
* [[iolE]]
 +
* [[iolF]]
 +
* [[iolG]]
 +
* [[iolH]]
 +
* [[iolI]]
 +
* [[iolJ]]
 +
* [[iolR]]
 +
* [[iolS]]
 +
* [[iolT]]
 +
* [[iolW]]
 +
* [[iolX]]
 +
 +
=== Utilization of amino sugars ===
 +
* [[gamA]]
 +
* [[gamP]]
 +
* [[murP]]
 +
* [[murQ]]
 +
* [[murR]]
 +
* [[nagA]]
 +
* [[nagB]]
 +
* [[nagP]]
 +
* [[ybgA]]
 +
* [[yurJ]]
 +
* [[yurK]]
 +
* [[yurL]]
 +
* [[yurM]]
 +
* [[yurN]]
 +
* [[yurO]]
 +
* [[yurP]]
 +
* [[yvoA]]
 +
 +
=== Utilization of beta-glucosides ===
 +
* [[bglA]]
 +
* [[bglH]]
 +
* [[bglP]]
 +
* [[licT]]
 +
* [[yckE]]
 +
 +
=== Utilization of sucrose ===
 +
* [[fruC]]
 +
* [[fruC]]
 +
* [[sacA]]
 +
* [[sacB]]
 +
* [[sacP]]
 +
* [[sacT]]
 +
* [[sacX]]
 +
* [[sacY]]
 +
 +
=== Utilization of trehalose ===
 +
* [[glcK]]
 +
* [[treA]]
 +
* [[treP]]
 +
* [[treR]]
 +
 +
=== Utilization of melibiose ===
 +
* [[amyC]]
 +
* [[amyD]]
 +
* [[melA]]
 +
* [[msmE]]
 +
* [[msmR]]
 +
* [[msmX]]
 +
 +
=== Utilization of maltose ===
 +
* [[glcK]]
 +
* [[glvR]]
 +
* [[malA]]
 +
* [[malP]]
 +
* [[yvdK]]
 +
 +
=== Utilization of starch/ maltodextrin ===
 +
* [[amyE]]
 +
* [[amyX]]
 +
* [[glcK]]
 +
* [[maa]]
 +
* [[maa]]
 +
* [[malL]]
 +
* [[malL]]
 +
* [[mdxE]]
 +
* [[mdxF]]
 +
* [[mdxG]]
 +
* [[msmX]]
 +
* [[pgcM]]
 +
* [[yvdE]]
 +
* [[yvdF]]
 +
* [[yvdF]]
 +
 +
=== Utilization of glucomannan ===
 +
* [[gmuA]]
 +
* [[gmuB]]
 +
* [[gmuC]]
 +
* [[gmuD]]
 +
* [[gmuE]]
 +
* [[gmuF]]
 +
* [[gmuG]]
 +
* [[gmuR]]
 +
 +
=== Utilization of pectin ===
 +
* [[ybcM]]
 +
* [[yesO]]
 +
* [[yesP]]
 +
* [[yesQ]]
 +
* [[yesR]]
 +
* [[yesS]]
 +
* [[yesT]]
 +
* [[yesV]]
 +
* [[yesW]]
 +
* [[yesX]]
 +
* [[yesY]]
 +
* [[yesZ]]
 +
* [[yteR]]
 +
 +
=== Utilization of other polymeric carbohydrates ===
 +
* [[bglC]]
 +
* [[bglS]]
 +
* [[csn]]
 +
* [[cycB]]
 +
* [[lacA]]
 +
* [[lacR]]
 +
* [[levB]]
 +
* [[levD]]
 +
* [[levE]]
 +
* [[levF]]
 +
* [[levG]]
 +
* [[levR]]
 +
* [[licA]]
 +
* [[licB]]
 +
* [[licC]]
 +
* [[licH]]
 +
* [[licR]]
 +
* [[licT]]
 +
* [[pel]]
 +
* [[pelB]]
 +
* [[pelC]]
 +
* [[sacC]]
 +
* [[senS]]
 +
* [[xynC]]
 +
* [[xynD]]
 +
* [[ysdC]]
 +
* [[ytoP]]
 +
* [[yugT]]
 +
* [[yvfL]]
 +
* [[yvfM]]
 +
* [[yvfO]]

Revision as of 14:38, 29 November 2010

Parent categories
Neighbouring categories
Related categories

none

Genes in this functional category

Utilization of organic acids

Utilization of acetoin

Utilization of glycerol/ glycerol-3-phosphate

Utilization of ribose

Utilization of xylan/ xylose

Utilization of arabinan/ arabinose/ arabitol

Utilization of fructose

Utilization of galactose

Utilization of mannose

Utilization of mannitol

Utilization of glucitol

Utilization of rhamnose

Utilization of gluconate

Utilization of glucarate/galactarate

Utilization of hexuronate

Utilization of inositol

Utilization of amino sugars

Utilization of beta-glucosides

Utilization of sucrose

Utilization of trehalose

Utilization of melibiose

Utilization of maltose

Utilization of starch/ maltodextrin

Utilization of glucomannan

Utilization of pectin

Utilization of other polymeric carbohydrates