Difference between revisions of "Sporulation"
(→Newly identified sporulation proteins (based on transcription profiling)) |
|||
Line 452: | Line 452: | ||
* ''[[ycgI]]'' | * ''[[ycgI]]'' | ||
* ''[[ycgL]]'' | * ''[[ycgL]]'' | ||
− | + | ||
* ''[[yetF]]'' | * ''[[yetF]]'' | ||
* ''[[yfhS]]'' | * ''[[yfhS]]'' |
Revision as of 18:25, 30 April 2013
Parent categories | |
Neighbouring categories |
|
Related categories | |
Contents
- 1 Genes in this functional category
- 2 Important reviews
- 3 Important original publications
- 4 Back to categories
Genes in this functional category
Spore coat proteins
Class I
- these proteins completly cover the membrane around the forespore
- early localizing spore coat proteins
Class II
- these proteins localize simultaneously with the class I proteins but begin to encase the spore only after engulfment is complete
- early localizing spore coat proteins
Class III
- these proteins localize simultaneously with the class I and class II proteins but start to encase the spore only after the appearance of phase dark spores (hr 4.5)
- early localizing spore coat proteins
Class IV
- late localizing spore coat proteins (only after completion of engulfment)
- intermediate between classes III and V
Class V
- late localizing spore coat proteins (only after completion of engulfment)
- localize exclusively to phase dark spores
- localize simultaneously to both poles of the spore
Class VI
- late localizing spore coat proteins (only after completion of engulfment)
- most delayed initial localization
- localize excluseively to phase bright spores
Important publications on the spore coat
Additional publications: PubMed
Spore coat protein/ based on similarity
Small acid-soluble spore proteins
Sporulation proteins/ other
- adhB
- asd
- asnO
- azoR2
- bdbC
- bdbD
- bofA
- bofC
- ccpB
- cdaS
- cgeB
- cgeC
- cgeD
- cgeE
- chaA
- clpC
- cotR
- coxA
- csbX
- ctaA
- ctpB
- cwlC
- cwlH
- dacB
- dacF
- dapA
- dapG
- divIB
- divIC
- exoA
- exuR
- exuT
- fabL
- fin
- fisB
- ftsY
- gin
- glcU
- glgA
- glgB
- glgC
- glgD
- glgP
- glnH
- glnM
- glnP
- glnQ
- ispG
- kamA
- katX
- ksgA
- ldt
- lonB
- lysA
- lytH
- mbl
- mcsA
- mcsB
- mmgA
- mmgB
- mmgC
- mmgD
- mmgE
- murB
- murG
- mutTA
- nfo
- pbpF
- pbpG
- pbpI
- pdaB
- phoB
- phoP
- phoR
- prkA
- remA
- rsfA
- safA
- sbp
- scoA
- scoB
- seaA
- sigF
- sigG
- sodF
- splA
- splB
- spmA
- spmB
- spoIIAA
- spoIIAB
- spoIID
- spoIIIAA
- spoIIIAB
- spoIIIAC
- spoIIIAD
- spoIIIAE
- spoIIIAF
- spoIIIAG
- spoIIIAH
- spoIIIC
- spoIIID
- spoIIM
- spoIIP
- spoIIQ
- spoIIR
- spoIISA
- spoIVA
- spoIVB
- spoIVCA
- spoIVCB
- spoIVFA
- spoIVFB
- spoVAA
- spoVAB
- spoVAC
- spoVAF
- spoVB
- spoVD
- spoVE
- spoVFA
- spoVFB
- spoVR
- spoVT
- spsA
- spsB
- spsC
- spsD
- spsE
- spsF
- spsG
- spsI
- spsJ
- spsK
- spsL
- sqhC
- sscA
- stoA
- tepA
- tlp
- tuaF
- tuaG
- tuaH
- usd
- uxaA
- uxaB
- uxuA
- yabG
- yabP
- yabQ
- yabR
- yabT
- ybaK
- ybxH
- ycgF
- ycgG
- yckC
- yckD
- ydcA
- ydcC
- ydfR
- ydfS
- ydgA
- ydgB
- ydhD
- ydhF
- ydjP
- yeaA
- yesJ
- yesK
- yfnD
- yfnE
- yfnF
- yfnG
- yfnH
- yhaL
- ykoU
- ykoV
- ykvI
- ykvP
- ykvQ
- ylaJ
- ylaM
- ylbB
- ylbC
- ylbD
- ylbE
- ylbJ
- ylmC
- ylxW
- ylxX
- ylyA
- ylzJ
- ymxH
- yndA
- yndL
- yngE
- yngF
- yngG
- yngH
- yngHB
- yngI
- yngJ
- yoaR
- yoaW
- yobW
- yocL
- yodH
- yodI
- yodP
- yodQ
- yodR
- yodS
- yodT
- ypfB
- yphA
- ypjB
- ypqA
- ypzA
- yqcK
- yqfC
- yqfD
- yqfQ
- yqfU
- yqfX
- yqfZ
- yqhG
- yqhH
- yqhP
- yqhQ
- yqiQ
- yqxA
- yqzG
- yrkC
- yrrD
- yrrS
- ytaF
- ytcC
- yteA
- yteV
- ytfI
- ytfJ
- ytlA
- ytlC
- ytlD
- ytrH
- ytrI
- ytvI
- ytxC
- yuiC
Newly identified sporulation proteins (based on transcription profiling)
- yetF
- yfhS
- yflJ
- yflN
- yfmA
- yhbB
- yhcT
- yhdB
- yhdC
- yheF
- yhfA
- yhfN
- yhjQ
- yisJ
- yisN
- yitE
- yitQ
- yjaZ
- yjbE
- yjnA
- yjqC
- yjzB
- ykjA
- ykoN
- ykoP
- ykoQ
- ykoS
- ykoY
- ykpC
- ykuS
- ykwB
- ykzD
- ykzE
- ykzH
- ymaF
- ymfJ
- yndM
- ynfE
- yngK
- yngL
- ynzE
- yoaM
- yoaQ
- yodL
- yodN
- yojB
- yozD
- yozE
- yozF
- yozN
- ypeP
- ypeQ
- yppC
- yppD
- yppG
- yptA
- ypzC
- yqfT
- yqgE
- yqgO
- yqhO
- yqhR
- yqhV
- yqjB
- yqjC
- yrbG
- yrrI
- yrzA
- yrzE
- yrzK
- yteT
- ytvB
- ytwI
- ytzC
- ytzH
- yueG
- yufS
- yumB
- yunC
- yurZ
- yusW
- yutC
- yutG
- yuzE
- yuzF
- yvaC
- ywaF
- ywbB
- ywkF
- ywmA
- ywnG
- ywoC
- yyaL
- yybP
- yycO
- yycP
- yycQ
- yyzB
Important reviews
Additional reviews: PubMed
Douglas Higgins, Jonathan Dworkin
Recent progress in Bacillus subtilis sporulation.
FEMS Microbiol Rev: 2012, 36(1);131-48
[PubMed:22091839]
[WorldCat.org]
[DOI]
(I p)
Michiel J L de Hoon, Patrick Eichenberger, Dennis Vitkup
Hierarchical evolution of the bacterial sporulation network.
Curr Biol: 2010, 20(17);R735-45
[PubMed:20833318]
[WorldCat.org]
[DOI]
(I p)
Imrich Barák, Anthony J Wilkinson
Where asymmetry in gene expression originates.
Mol Microbiol: 2005, 57(3);611-20
[PubMed:16045607]
[WorldCat.org]
[DOI]
(P p)
Michael D Yudkin, Joanna Clarkson
Differential gene expression in genetically identical sister cells: the initiation of sporulation in Bacillus subtilis.
Mol Microbiol: 2005, 56(3);578-89
[PubMed:15819616]
[WorldCat.org]
[DOI]
(P p)
Imrich Barák, Ezio Ricca, Simon M Cutting
From fundamental studies of sporulation to applied spore research.
Mol Microbiol: 2005, 55(2);330-8
[PubMed:15659154]
[WorldCat.org]
[DOI]
(P p)
Patrick J Piggot, David W Hilbert
Sporulation of Bacillus subtilis.
Curr Opin Microbiol: 2004, 7(6);579-86
[PubMed:15556029]
[WorldCat.org]
[DOI]
(P p)
David W Hilbert, Patrick J Piggot
Compartmentalization of gene expression during Bacillus subtilis spore formation.
Microbiol Mol Biol Rev: 2004, 68(2);234-62
[PubMed:15187183]
[WorldCat.org]
[DOI]
(P p)
Jeff Errington
Regulation of endospore formation in Bacillus subtilis.
Nat Rev Microbiol: 2003, 1(2);117-26
[PubMed:15035041]
[WorldCat.org]
[DOI]
(P p)
R R Freedman
Raynaud's phenomenon, lack of neurological influence.
Br J Rheumatol: 1990, 29(6);492-3
[PubMed:2257467]
[WorldCat.org]
[DOI]
(P p)
Important original publications
Jordi van Gestel, Martin A Nowak, Corina E Tarnita
The evolution of cell-to-cell communication in a sporulating bacterium.
PLoS Comput Biol: 2012, 8(12);e1002818
[PubMed:23284278]
[WorldCat.org]
[DOI]
(I p)
Wishwas Abhyankar, Alex Ter Beek, Henk Dekker, Remco Kort, Stanley Brul, Chris G de Koster
Gel-free proteomic identification of the Bacillus subtilis insoluble spore coat protein fraction.
Proteomics: 2011, 11(23);4541-50
[PubMed:21905219]
[WorldCat.org]
[DOI]
(I p)
Langyong Mao, Shantong Jiang, Bin Wang, Liang Chen, Qin Yao, Keping Chen
Protein profile of Bacillus subtilis spore.
Curr Microbiol: 2011, 63(2);198-205
[PubMed:21667307]
[WorldCat.org]
[DOI]
(I p)
Daisuke Imamura, Ritsuko Kuwana, Hiromu Takamatsu, Kazuhito Watabe
Proteins involved in formation of the outermost layer of Bacillus subtilis spores.
J Bacteriol: 2011, 193(16);4075-80
[PubMed:21665972]
[WorldCat.org]
[DOI]
(I p)