Difference between revisions of "Transporters/ other"
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* 1.2.1. [[ABC transporters]] | * 1.2.1. [[ABC transporters]] | ||
* 1.2.2. [[Phosphotransferase systems]] | * 1.2.2. [[Phosphotransferase systems]] | ||
| − | * 1.2.3. [[Transporters/ other]] | + | * 1.2.3. [[ECF transporter]] |
| + | * 1.2.4. [[Transporters/ other]] | ||
|Related= | |Related= | ||
| − | + | * [[transport proteins]] | |
| + | * [[APC superfamily of transport proteins]] | ||
|}} | |}} | ||
| + | == Important web site: [http://www.tcdb.org The transporter classification database] == | ||
== Genes in this functional category == | == Genes in this functional category == | ||
| − | * [[ | + | |
| − | * [[ | + | ===Amino acid transporters === |
| − | * [[ | + | ==== solute:sodium symporter family ==== |
| − | * [[ | + | * ''[[gltT]]'' |
| − | * [[ | + | * ''[[opuE]]'' |
| − | * [[azlC]] | + | * ''[[putP]]'' |
| − | * [[azlD]] | + | * ''[[yodF]]'' |
| − | * [[bcaP]] | + | * ''[[ywcA]]'' |
| − | * [[ | + | ==== Other amino acid transporters ==== |
| − | * [[ | + | * ''[[aapA]]'' |
| − | * [[ | + | * ''[[azlC]]'' |
| − | * [[ | + | * ''[[azlD]]'' |
| − | * [[ | + | * ''[[bcaP]]'' |
| − | * [[ | + | * ''[[braB]]'' |
| − | * [[ | + | * ''[[brnQ]]'' |
| − | * [[ | + | * ''[[cysP]]'' |
| − | * [[ | + | * ''[[glnT]]'' |
| − | * [[ | + | * ''[[gltP]]'' |
| − | * [[ | + | |
| − | * [[ | + | * ''[[hutM]]'' |
| − | * [[ | + | * ''[[rocC]]'' |
| − | * [[ | + | * ''[[rocE]]'' |
| − | * [[ | + | * ''[[steT]]'' |
| − | * [[ | + | * ''[[tcyP]]'' |
| − | * [[ | + | * ''[[ybgF]]'' |
| − | * [[ | + | * ''[[ybxG]]'' |
| − | * [[ | + | * ''[[ydgF]]'' |
| − | * [[ | + | * ''[[yrbD]]'' |
| − | * [[ | + | * ''[[ytnA]]'' |
| − | * [[ | + | * ''[[yvbW]]'' |
| − | * [[ | + | * ''[[yveA]]'' |
| − | * [[ | + | |
| − | * [[ | + | ===Peptide transporter=== |
| − | * [[ | + | * ''[[dtpT]]'' |
| − | * [[ | + | |
| − | * [[ | + | ===Carbohydrate transporter=== |
| − | * [[ | + | * ''[[araE]]'' |
| − | * [[ | + | * ''[[exuT]]'' |
| − | * [[ | + | * ''[[glcP]]'' |
| − | * [[ | + | * ''[[glcU]]'' |
| − | * [[ | + | * ''[[glpF]]'' |
| − | * [[ | + | * ''[[glpT]]'' |
| − | * [[ | + | * ''[[gntP]]'' |
| − | * [[ | + | * ''[[gutP]]'' |
| − | * [[ | + | * ''[[iolF]]'' |
| − | * [[ | + | * ''[[iolT]]'' |
| − | * [[ | + | * ''[[kdgT]]'' |
| − | * [[ | + | * ''[[mdtP]]'' |
| − | * [[ | + | * ''[[xynP]]'' |
| − | * [[lutP]] | + | * ''[[ycbE]]'' |
| − | * [[maeN]] | + | * ''[[yfiG]]'' |
| − | * [[ | + | * ''[[yjmB]]'' |
| − | * [[ | + | |
| − | * [[ | + | ===Transporter for organic acids=== |
| − | * [[ | + | * ''[[alsT]]'' |
| − | * [[ | + | * ''[[cimH]]'' |
| − | * [[ | + | * ''[[citH]]'' |
| − | * [[ | + | * ''[[citM]]'' |
| − | * [[ | + | * ''[[dctP]]'' |
| − | * [[ | + | * ''[[gabP]]'' |
| − | * [[ | + | * ''[[lctP]]'' |
| − | * [[ | + | * ''[[lutP]]'' |
| − | * [[ | + | * ''[[maeN]]'' |
| − | * [[ | + | * ''[[mleN]]'' |
| − | * [[ | + | * ''[[ybaR]]'' |
| − | * [[ | + | * ''[[yflS]]'' |
| − | * [[ | + | * ''[[yoaB]]'' |
| − | * [[ | + | * ''[[yraO]]'' |
| − | * [[ | + | * ''[[ysbA]]'' |
| − | * [[ | + | |
| − | * [[ | + | ===Metal ion transporter=== |
| − | * [[ | + | * ''[[arsB]]'' |
| − | * [[ | + | * ''[[aseA]]'' |
| − | * [[ | + | * ''[[cadA]]'' |
| − | * [[ | + | * ''[[chaA]]'' |
| − | * [[ | + | * ''[[copA]]'' |
| − | * [[ | + | * ''[[copZ]]'' |
| − | * [[ | + | * ''[[corA]]'' |
| − | * [[ | + | * ''[[czcD]]'' |
| − | * [[ | + | * [[EfeO]]-[[EfeU]] |
| − | * [[ | + | * [[KhtT]]-[[KhtU]] |
| − | * [[ | + | * [[KtrA]]-[[KtrB]] |
| − | * [[ | + | * [[KtrC]]-[[KtrD]] |
| − | * [[ | + | * ''[[mgtE]]'' |
| − | * [[ | + | * ''[[mntH]]'' |
| − | * [[ | + | * ''[[mrpA]]'' |
| − | * [[ | + | * ''[[mrpB]]'' |
| − | * [[ | + | * ''[[mrpC]]'' |
| − | * [[ | + | * ''[[mrpD]]'' |
| − | * [[ | + | * ''[[mrpE]]'' |
| − | * [[ | + | * ''[[mrpF]]'' |
| − | * [[ | + | * ''[[mrpG]]'' |
| − | * [[ | + | * ''[[nhaC]]'' |
| − | * [[ | + | * ''[[nhaK]]'' |
| − | * [[ | + | * ''[[pfeT]]'' |
| − | * [[ | + | * ''[[yciB]]'' |
| − | * [[ | + | * ''[[ycnJ]]'' |
| − | * [[ | + | * ''[[yfjQ]]'' |
| − | * [[ | + | * ''[[yugO]]'' |
| − | * [[ | + | ===Nucleotide/ nucleoside transporter=== |
| − | * [[ | + | * ''[[nupC]]'' |
| − | * [[ | + | * ''[[nupG]]'' |
| − | * [[ | + | * ''[[pbuE]]'' |
| − | * [[ | + | * ''[[pbuG]]'' |
| − | * [[ | + | * ''[[pbuO]]'' |
| − | * [[ | + | * ''[[pbuX]]'' |
| − | * [[ | + | * ''[[pucI]]'' |
| − | * [[ | + | * ''[[pucJ]]'' |
| − | * [[ | + | * ''[[pucK]]'' |
| − | * [[ | + | * ''[[pyrP]]'' |
| − | * [[ | + | |
| − | * [[ | + | ===Transporter for cofactors=== |
| − | * [[ | + | * ''[[niaP]]'' |
| − | * [[ | + | |
| − | * [[ | + | === Uptake of other small ions === |
| − | * [[ | + | * ''[[nasA]]'' |
| − | * [[ | + | * ''[[nrgA]]'' |
| − | * [[ | + | * ''[[pit]]'' |
| − | * [[ | + | *'' [[yqeW]]'' |
| − | * [[ | + | |
| − | * [[ | + | === Uptake of compatible solutes === |
| − | * [[ | + | * ''[[opuD]]'' |
| − | * [[ | + | * ''[[opuE]]'' |
| − | * [[ | + | |
| − | * [[ | + | === Siderophore exporters === |
| − | * [[ | + | * ''[[ymfD]]'' |
| − | * [[ | + | |
| − | * [[ | + | === Metal ion exporters === |
| − | * [[ | + | * ''[[mneP]]'' |
| − | * [[ | + | * ''[[mneS]]'' |
| − | * [[ | + | |
| − | * [[ | + | === Multidrug exporters === |
| − | * [[ | + | * ''[[ebrA]]'' |
| − | * [[ | + | * ''[[ebrB]]'' |
| − | * [[ | + | * ''[[yvaD]]'' |
| − | * [[ | + | * ''[[yvaE]]'' |
| − | * [[ | + | * ''[[yvdR]]'' |
| − | * [[ | + | * ''[[yvdS]]'' |
| − | * [[ | + | |
| − | * [[ | + | === Other exporters === |
| − | * [[ | + | * ''[[blt]]'' |
| − | * [[ | + | * ''[[bmr]]'' |
| − | * [[ | + | * ''[[epsK]]'' |
| − | * [[ | + | * ''[[mdr]]'' |
| − | * [[ | + | * ''[[narK]]'' |
| − | * [[ | + | * ''[[trkA]]'' |
| − | * [[ | + | * ''[[ykkC]]'' |
| − | * [[ | + | * ''[[ykkD]]'' |
| − | * [[ | + | * ''[[ywrA]]'' |
| − | * [[ | + | * ''[[ywrB]]'' |
| − | * [[ | + | |
| − | * [[ | + | ===Other transporters=== |
| − | * [[ | + | * ''[[csbC]]'' |
| − | * [[ | + | * ''[[cstA]]'' |
| − | * [[ | + | * ''[[dltB]]'' |
| − | * [[ | + | * ''[[lmrB]]'' |
| − | * [[ | + | * ''[[tetB]]'' |
| − | * [[ | + | * ''[[ybaS]]'' |
| − | * [[ | + | * ''[[ybcL]]'' |
| − | * [[ | + | * ''[[ybeC]]'' |
| − | * [[ | + | |
| − | * [[ | + | * ''[[ycbK]]'' |
| − | * [[ | + | |
| − | * [[ | + | * ''[[yceJ]]'' |
| − | * [[ | + | *'' [[ycgH]]'' |
| − | * [[ | + | |
| − | * [[ | + | * ''[[ycnB]]'' |
| − | * [[ | + | * ''[[ycsG]]'' |
| − | * [[ | + | * ''[[ydbO]]'' |
| − | * [[ | + | * ''[[yddS]]'' |
| − | * [[ | + | * ''[[ydeG]]'' |
| − | * [[ | + | * ''[[ydeR]]'' |
| − | * [[ | + | |
| − | * [[ | + | * ''[[ydgH]]'' |
| − | * [[ | + | * ''[[ydgK]]'' |
| − | * [[ | + | |
| − | * [[ | + | * ''[[yecA]]'' |
| − | * [[ | + | * ''[[yfhI]]'' |
| − | * [[ | + | * ''[[yfiS]]'' |
| − | * [[ | + | * ''[[yfiU]]'' |
| − | * [[ | + | * ''[[yfkF]]'' |
| − | * [[ | + | * ''[[yfkL]]'' |
| − | * [[ | + | * ''[[yflA]]'' |
| − | * [[ | + | * ''[[yfmI]]'' |
| − | * [[ywrK]] | + | * ''[[yfmO]]'' |
| − | * [[ywtG]] | + | * ''[[yfnA]]'' |
| − | * [[yxaH]] | + | * ''[[yhcA]]'' |
| − | * [[yxeR]] | + | * ''[[yhdH]]'' |
| − | * [[yxlA]] | + | * ''[[yhjB]]'' |
| − | * [[yxlH]] | + | * ''[[yhjO]]'' |
| − | * [[yybF]] | + | * ''[[yitG]]'' |
| − | * [[yybO]] | + | * ''[[yitZ]]'' |
| − | * [[yycB]] | + | * ''[[yjbB]]'' |
| − | + | * ''[[yjbQ]]'' | |
| + | * ''[[ykuC]]'' | ||
| + | * ''[[yloB]]'' | ||
| + | * ''[[yncC]]'' | ||
| + | * ''[[yoaV]]'' | ||
| + | * ''[[yocN]]'' | ||
| + | * ''[[yocR]]'' | ||
| + | * ''[[yocS]]'' | ||
| + | |||
| + | * ''[[yojA]]'' | ||
| + | * ''[[ypnP]]'' | ||
| + | * ''[[yqjV]]'' | ||
| + | * ''[[yrhG]]'' | ||
| + | * ''[[yrhP]]'' | ||
| + | * ''[[ytbD]]'' | ||
| + | |||
| + | * ''[[ytoA]]'' | ||
| + | * ''[[yttB]]'' | ||
| + | * ''[[yubD]]'' | ||
| + | |||
| + | * ''[[yutK]]'' | ||
| + | * ''[[yuxJ]]'' | ||
| + | |||
| + | * ''[[yvbV]]'' | ||
| + | |||
| + | * ''[[yvdB]]'' | ||
| + | * ''[[yvgK]]'' | ||
| + | * ''[[yvgT]]'' | ||
| + | * ''[[yvkA]]'' | ||
| + | * ''[[yvmA]]'' | ||
| + | * ''[[yvqJ]]'' | ||
| + | * ''[[yvsH]]'' | ||
| + | * ''[[ywcJ]]'' | ||
| + | * ''[[ywoD]]'' | ||
| + | * ''[[ywrK]]'' | ||
| + | * ''[[ywtG]]'' | ||
| + | * ''[[yxaH]]'' | ||
| + | * ''[[yxeR]]'' | ||
| + | * ''[[yxlA]]'' | ||
| + | * ''[[yxlH]]'' | ||
| + | * ''[[yybF]]'' | ||
| + | * ''[[yybO]]'' | ||
| + | * ''[[yycB]]'' | ||
| + | |||
| + | =Relevant publications= | ||
| + | <pubmed> 20497229 11763970 15247498 10839820 12787345 10943556 9529885 24225317 </pubmed> | ||
| + | |||
| + | =Back to [[categories]]= | ||
Latest revision as of 08:56, 22 December 2016
| Parent categories |
|
| Neighbouring categories |
|
| Related categories | |
Contents
- 1 Important web site: The transporter classification database
- 2 Genes in this functional category
- 2.1 Amino acid transporters
- 2.2 Peptide transporter
- 2.3 Carbohydrate transporter
- 2.4 Transporter for organic acids
- 2.5 Metal ion transporter
- 2.6 Nucleotide/ nucleoside transporter
- 2.7 Transporter for cofactors
- 2.8 Uptake of other small ions
- 2.9 Uptake of compatible solutes
- 2.10 Siderophore exporters
- 2.11 Metal ion exporters
- 2.12 Multidrug exporters
- 2.13 Other exporters
- 2.14 Other transporters
- 3 Relevant publications
- 4 Back to categories
Important web site: The transporter classification database
Genes in this functional category
Amino acid transporters
solute:sodium symporter family
Other amino acid transporters
Peptide transporter
Carbohydrate transporter
Transporter for organic acids
Metal ion transporter
- arsB
- aseA
- cadA
- chaA
- copA
- copZ
- corA
- czcD
- EfeO-EfeU
- KhtT-KhtU
- KtrA-KtrB
- KtrC-KtrD
- mgtE
- mntH
- mrpA
- mrpB
- mrpC
- mrpD
- mrpE
- mrpF
- mrpG
- nhaC
- nhaK
- pfeT
- yciB
- ycnJ
- yfjQ
- yugO
Nucleotide/ nucleoside transporter
Transporter for cofactors
Uptake of other small ions
Uptake of compatible solutes
Siderophore exporters
Metal ion exporters
Multidrug exporters
Other exporters
Other transporters
- yecA
- yfhI
- yfiS
- yfiU
- yfkF
- yfkL
- yflA
- yfmI
- yfmO
- yfnA
- yhcA
- yhdH
- yhjB
- yhjO
- yitG
- yitZ
- yjbB
- yjbQ
- ykuC
- yloB
- yncC
- yoaV
- yocN
- yocR
- yocS
Relevant publications
Milton H Saier, Vamsee S Reddy, Dorjee G Tamang, Ake Västermark
The transporter classification database.
Nucleic Acids Res: 2014, 42(Database issue);D251-8
[PubMed:24225317]
[WorldCat.org]
[DOI]
(I p)
Thomas Eitinger, Dmitry A Rodionov, Mathias Grote, Erwin Schneider
Canonical and ECF-type ATP-binding cassette importers in prokaryotes: diversity in modular organization and cellular functions.
FEMS Microbiol Rev: 2011, 35(1);3-67
[PubMed:20497229]
[WorldCat.org]
[DOI]
(I p)
Wolfgang Busch, Milton H Saier, International Union of Biochemistry and Molecular Biology (IUBMB)
The IUBMB-endorsed transporter classification system.
Mol Biotechnol: 2004, 27(3);253-62
[PubMed:15247498]
[WorldCat.org]
[DOI]
(P p)
Milton H Saier
Tracing pathways of transport protein evolution.
Mol Microbiol: 2003, 48(5);1145-56
[PubMed:12787345]
[WorldCat.org]
[DOI]
(P p)
Milton H Saier, Seth R Goldman, Randal R Maile, Matthew S Moreno, Walter Weyler, Nelson Yang, Ian T Paulsen
Transport capabilities encoded within the Bacillus subtilis genome.
J Mol Microbiol Biotechnol: 2002, 4(1);37-67
[PubMed:11763970]
[WorldCat.org]
(P p)
M H Saier, J T Beatty, A Goffeau, K T Harley, W H Heijne, S C Huang, D L Jack, P S Jähn, K Lew, J Liu, S S Pao, I T Paulsen, T T Tseng, P S Virk
The major facilitator superfamily.
J Mol Microbiol Biotechnol: 1999, 1(2);257-79
[PubMed:10943556]
[WorldCat.org]
(P p)
M H Saier
A functional-phylogenetic classification system for transmembrane solute transporters.
Microbiol Mol Biol Rev: 2000, 64(2);354-411
[PubMed:10839820]
[WorldCat.org]
[DOI]
(P p)
S S Pao, I T Paulsen, M H Saier
Major facilitator superfamily.
Microbiol Mol Biol Rev: 1998, 62(1);1-34
[PubMed:9529885]
[WorldCat.org]
[DOI]
(P p)
