Difference between revisions of "SigE regulon"
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| − | = Genes in this regulon = | + | = Genes in this [[regulon]] = |
* ''[[asnO]]'' | * ''[[asnO]]'' | ||
* ''[[bdbC]]'' | * ''[[bdbC]]'' | ||
* ''[[bdbD]]'' | * ''[[bdbD]]'' | ||
* ''[[bofA]]'' | * ''[[bofA]]'' | ||
| + | * ''[[cmpA]]'' | ||
| + | * ''[[cotB]]'' | ||
* ''[[cotE]]'' | * ''[[cotE]]'' | ||
| + | * ''[[cotG]]'' | ||
| + | * ''[[cotH]]'' | ||
* ''[[cotJA]]'' | * ''[[cotJA]]'' | ||
* ''[[cotJB]]'' | * ''[[cotJB]]'' | ||
* ''[[cotJC]]'' | * ''[[cotJC]]'' | ||
| + | * ''[[cotM]]'' | ||
* ''[[cotO]]'' | * ''[[cotO]]'' | ||
| + | * ''[[cotT]]'' | ||
| + | * ''[[cotX]]'' | ||
| + | * ''[[cotY]]'' | ||
| + | * ''[[cotZ]]'' | ||
* ''[[coxA]]'' | * ''[[coxA]]'' | ||
* ''[[ctaA]]'' | * ''[[ctaA]]'' | ||
| Line 23: | Line 32: | ||
* ''[[exuR]]'' | * ''[[exuR]]'' | ||
* ''[[exuT]]'' | * ''[[exuT]]'' | ||
| + | * ''[[fisB]]'' | ||
* ''[[gerM]]'' | * ''[[gerM]]'' | ||
* ''[[gerQ]]'' | * ''[[gerQ]]'' | ||
| Line 31: | Line 41: | ||
* ''[[glgD]]'' | * ''[[glgD]]'' | ||
* ''[[glgP]]'' | * ''[[glgP]]'' | ||
| + | * ''[[glnH]]'' | ||
| + | * ''[[glnM]]'' | ||
| + | * ''[[glnP]]'' | ||
| + | * ''[[glnQ]]'' | ||
| + | * ''[[hbuT]]-[[scoA]]-[[scoB]]-[[yxjF]]'' | ||
* ''[[ispG]]'' | * ''[[ispG]]'' | ||
* ''[[mbl]]'' | * ''[[mbl]]'' | ||
| Line 49: | Line 64: | ||
* ''[[safA]]'' | * ''[[safA]]'' | ||
* ''[[sbp]]'' | * ''[[sbp]]'' | ||
| − | |||
| − | |||
* ''[[sodF]]'' | * ''[[sodF]]'' | ||
* ''[[spmA]]'' | * ''[[spmA]]'' | ||
| Line 79: | Line 92: | ||
* ''[[spoVM]]'' | * ''[[spoVM]]'' | ||
* ''[[spoVR]]'' | * ''[[spoVR]]'' | ||
| − | * ''[[spsJ]] | + | * ''[[spsA]]-[[spsB]]-[[spsC]]-[[spsD]]-[[spsE]]-[[spsF]]-[[spsG]]-[[spsI]]-[[spsJ]]-[[spsK]]-[[spsL]]'' |
| − | |||
* ''[[sqhC]]'' | * ''[[sqhC]]'' | ||
* ''[[stoA]]'' | * ''[[stoA]]'' | ||
| + | * ''[[tgl]]'' | ||
* ''[[usd]]'' | * ''[[usd]]'' | ||
* ''[[uxaA]]'' | * ''[[uxaA]]'' | ||
| Line 88: | Line 101: | ||
* ''[[uxuA]]'' | * ''[[uxuA]]'' | ||
* ''[[yaaH]]'' | * ''[[yaaH]]'' | ||
| + | * ''[[yabP]]'' | ||
* ''[[yabQ]]'' | * ''[[yabQ]]'' | ||
* ''[[yabR]]'' | * ''[[yabR]]'' | ||
| Line 104: | Line 118: | ||
* ''[[yhaL]]'' | * ''[[yhaL]]'' | ||
* ''[[yhaX]]'' | * ''[[yhaX]]'' | ||
| + | * ''[[yhbB]]-[[cspR]]'' | ||
* ''[[yhbH]]'' | * ''[[yhbH]]'' | ||
* ''[[yhcO]]'' | * ''[[yhcO]]'' | ||
| Line 110: | Line 125: | ||
* ''[[yhjR]]'' | * ''[[yhjR]]'' | ||
* ''[[yhxC]]'' | * ''[[yhxC]]'' | ||
| + | * ''[[yisY]]'' | ||
* ''[[yitC]]'' | * ''[[yitC]]'' | ||
* ''[[yitD]]'' | * ''[[yitD]]'' | ||
| Line 123: | Line 139: | ||
* ''[[ykvU]]'' | * ''[[ykvU]]'' | ||
* ''[[ylbJ]]'' | * ''[[ylbJ]]'' | ||
| + | * ''[[ylmC]]'' | ||
* ''[[ylxW]]'' | * ''[[ylxW]]'' | ||
* ''[[ylxX]]'' | * ''[[ylxX]]'' | ||
| + | * ''[[ymxH]]'' | ||
* ''[[yncD]]'' | * ''[[yncD]]'' | ||
* ''[[yndA]]'' | * ''[[yndA]]'' | ||
| Line 131: | Line 149: | ||
* ''[[yngG]]'' | * ''[[yngG]]'' | ||
* ''[[yngH]]'' | * ''[[yngH]]'' | ||
| + | * ''[[yngHB]]'' | ||
* ''[[yngI]]'' | * ''[[yngI]]'' | ||
* ''[[yngJ]]'' | * ''[[yngJ]]'' | ||
| Line 136: | Line 155: | ||
* ''[[yobW]]'' | * ''[[yobW]]'' | ||
* ''[[yocL]]'' | * ''[[yocL]]'' | ||
| + | * ''[[yodT]]-[[yodS]]-[[yodR]]-[[yodQ]]-[[yodP]]-[[kamA]]-[[yokU]]'' | ||
* ''[[ypjB]]'' | * ''[[ypjB]]'' | ||
| + | * ''[[yppG]]'' | ||
* ''[[ypqA]]'' | * ''[[ypqA]]'' | ||
* ''[[yqfC]]'' | * ''[[yqfC]]'' | ||
| Line 146: | Line 167: | ||
* ''[[ysnD]]'' | * ''[[ysnD]]'' | ||
* ''[[ysxE]]'' | * ''[[ysxE]]'' | ||
| + | * ''[[ytaF]]'' | ||
* ''[[yteV]]'' | * ''[[yteV]]'' | ||
* ''[[ytrH]]'' | * ''[[ytrH]]'' | ||
| Line 151: | Line 173: | ||
* ''[[ytvI]]'' | * ''[[ytvI]]'' | ||
* ''[[ytxC]]'' | * ''[[ytxC]]'' | ||
| − | + | ||
* ''[[yusR]]'' | * ''[[yusR]]'' | ||
| + | * ''[[yutH]]'' | ||
* ''[[yuzC]]'' | * ''[[yuzC]]'' | ||
| + | * ''[[ywcA]]'' | ||
| + | * ''[[ywcB]]'' | ||
* ''[[yxeD]]'' | * ''[[yxeD]]'' | ||
| − | |||
| − | |||
* ''[[yyaD]]'' | * ''[[yyaD]]'' | ||
* ''[[yybI]]'' | * ''[[yybI]]'' | ||
| − | = Important publications on the [[SigE]] regulon = | + | |
| + | = Important publications on the [[SigE]] [[regulon]] = | ||
<pubmed>12662922,15383836,14523133</pubmed> | <pubmed>12662922,15383836,14523133</pubmed> | ||
| + | |||
| + | =Back to [[regulons]]= | ||
Latest revision as of 18:08, 31 May 2016
| Regulator | |
Genes in this regulon
- asnO
- bdbC
- bdbD
- bofA
- cmpA
- cotB
- cotE
- cotG
- cotH
- cotJA
- cotJB
- cotJC
- cotM
- cotO
- cotT
- cotX
- cotY
- cotZ
- coxA
- ctaA
- ctpB
- cwlD
- cwlJ
- dacB
- divIB
- divIC
- exuR
- exuT
- fisB
- gerM
- gerQ
- gerR
- glgA
- glgB
- glgC
- glgD
- glgP
- glnH
- glnM
- glnP
- glnQ
- hbuT-scoA-scoB-yxjF
- ispG
- mbl
- mmgA
- mmgB
- mmgC
- mmgD
- mmgE
- murB
- murG
- nucB
- pbpI
- pdaB
- phoB
- phoP
- phoR
- prkA
- safA
- sbp
- sodF
- spmA
- spmB
- spoIID
- spoIIIAA
- spoIIIAB
- spoIIIAC
- spoIIIAD
- spoIIIAE
- spoIIIAF
- spoIIIAG
- spoIIIAH
- spoIIIC
- spoIIID
- spoIIM
- spoIIP
- spoIVA
- spoIVCA
- spoIVCB
- spoIVFA
- spoIVFB
- spoVB
- spoVD
- spoVE
- spoVID
- spoVK
- spoVM
- spoVR
- spsA-spsB-spsC-spsD-spsE-spsF-spsG-spsI-spsJ-spsK-spsL
- sqhC
- stoA
- tgl
- usd
- uxaA
- uxaB
- uxuA
- yaaH
- yabP
- yabQ
- yabR
- ycgF
- ycgG
- yckC
- ydcA
- ydcC
- ydhD
- ydhF
- ydjP
- yeaA
- yesJ
- yesK
- yfnD
- yhaL
- yhaX
- yhbB-cspR
- yhbH
- yhcO
- yheC
- yheD
- yhjR
- yhxC
- yisY
- yitC
- yitD
- yjaV
- yjcA
- yjdH
- yjfA
- yjmC
- yjmD
- yjmF
- yknT
- ykvI
- ykvU
- ylbJ
- ylmC
- ylxW
- ylxX
- ymxH
- yncD
- yndA
- yngE
- yngF
- yngG
- yngH
- yngHB
- yngI
- yngJ
- yoaW
- yobW
- yocL
- yodT-yodS-yodR-yodQ-yodP-kamA-yokU
- ypjB
- yppG
- ypqA
- yqfC
- yqfD
- yqfZ
- yqiQ
- yqxA
- yrrS
- ysnD
- ysxE
- ytaF
- yteV
- ytrH
- ytrI
- ytvI
- ytxC
Important publications on the SigE regulon
Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836]
[WorldCat.org]
[DOI]
(I p)
Andrea Feucht, Louise Evans, Jeff Errington
Identification of sporulation genes by genome-wide analysis of the sigmaE regulon of Bacillus subtilis.
Microbiology (Reading): 2003, 149(Pt 10);3023-3034
[PubMed:14523133]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Shane T Jensen, Erin M Conlon, Christiaan van Ooij, Jessica Silvaggi, José Eduardo González-Pastor, Masaya Fujita, Sigal Ben-Yehuda, Patrick Stragier, Jun S Liu, Richard Losick
The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.
J Mol Biol: 2003, 327(5);945-72
[PubMed:12662922]
[WorldCat.org]
[DOI]
(P p)
