Difference between revisions of "SpoIIAA"
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23470&redirect=T BSU23470] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/dacF-spoIIAAB-sigF.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/dacF-spoIIAAB-sigF.html] | ||
Line 101: | Line 102: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23470&redirect=T BSU23470] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1TIL 1TIL] (complex with SpoIIAB, Geobacillus stearothermophilus), [http://www.rcsb.org/pdb/explore.do?structureId=1AUZ 1AUZ] (NMR) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1TIL 1TIL] (complex with SpoIIAB, Geobacillus stearothermophilus), [http://www.rcsb.org/pdb/explore.do?structureId=1AUZ 1AUZ] (NMR) |
Revision as of 14:07, 2 April 2014
- Description: anti-anti-SigF
Gene name | spoIIAA |
Synonyms | |
Essential | no |
Product | anti-anti-SigF |
Function | control of SigF activity |
Gene expression levels in SubtiExpress: spoIIAA | |
Interactions involving this protein in SubtInteract: SpoIIAA | |
Metabolic function and regulation of this protein in SubtiPathways: spoIIAA | |
MW, pI | 12 kDa, 5.855 |
Gene length, protein length | 351 bp, 117 aa |
Immediate neighbours | spoIIAB, dacF |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
sigma factors and their control, sporulation proteins, phosphoproteins
This gene is a member of the following regulons
AbrB regulon, SigF regulon, SigG regulon, SigH regulon, SinR regulon, Spo0A regulon
The gene
Basic information
- Locus tag: BSU23470
Phenotypes of a mutant
Database entries
- BsubCyc: BSU23470
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: anti-sigma-factor antagonist family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU23470
- UniProt: P10727
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation: repressed by glucose (5.2-fold) PubMed, dacF: expressed during sporulation, spoIIAA: expressed early during sporulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
- Tony Wilkinson, York University, U.K. homepage
- Charles Moran, Emory University, NC, USA homepage
Your additional remarks
References
Modeling of SigF activation
Original Publications