Difference between revisions of "SpoIVB"
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− | * '''Description:''' serine protease, cleaves [[SpoIVFA]], this results in pro-[[SigK]] processing/activation in the mother-cell, does also cleave [[CtpB]] <br/><br/> | + | * '''Description:''' serine protease, cleaves [[SpoIVFA]] to prepare it for [[CtpB]] cleavage, this results in pro-[[SigK]] processing/activation in the mother-cell, does also cleave [[CtpB]] <br/><br/> |
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* '''Catalyzed reaction/ biological activity:''' Self-cleaves 52-Val-|-Asn-53, 62-Ala-|-Phe-63 and 74-Val-|-Thr-75 at the N-terminus of SpoIVB (according to Swiss-Prot) | * '''Catalyzed reaction/ biological activity:''' Self-cleaves 52-Val-|-Asn-53, 62-Ala-|-Phe-63 and 74-Val-|-Thr-75 at the N-terminus of SpoIVB (according to Swiss-Prot) | ||
− | * '''Protein family:''' | + | * '''Protein family:''' PDZ protease {{PubMed|24243021}} |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
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* '''Modification:''' | * '''Modification:''' | ||
− | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
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** [[SpoIVB]]-[[BofA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/15292188 PubMed] | ** [[SpoIVB]]-[[BofA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/15292188 PubMed] | ||
** [[BofC]]-[[SpoIVB]] [http://www.ncbi.nlm.nih.gov/sites/entrez/10931291 PubMed] | ** [[BofC]]-[[SpoIVB]] [http://www.ncbi.nlm.nih.gov/sites/entrez/10931291 PubMed] | ||
+ | ** [[SpoIVB]]-[[SpoIVFA]] {{PubMed|24243021}} | ||
− | * '''[[Localization]]:''' | + | * '''[[Localization]]:''' |
+ | ** intracellular space between the mother cell and the forespore {{PubMed|24243021}} | ||
=== Database entries === | === Database entries === | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIVB_2519102_2520382_-1 spoIVB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIVB_2519102_2520382_-1 spoIVB] {{PubMed|22383849}} | ||
− | * '''Sigma factor:''' [[SigF]] {{PubMed|15699190,9004507}}, [[SigG]] {{PubMed|15699190,9004507}} | + | * '''[[Sigma factor]]:''' [[SigF]] {{PubMed|15699190,9004507}}, [[SigG]] {{PubMed|15699190,9004507}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
− | <pubmed>17493131 2106508 10931284,14526016,10931291,1900494,11418578, 15292188,9004507,12940997, 11741860,16497325,8755877 ,,15292188, 17557826 16818230 </pubmed> | + | <pubmed>17493131 2106508 10931284,14526016,10931291,1900494,11418578, 15292188,9004507,12940997, 11741860,16497325,8755877 ,24243021,15292188, 17557826 16818230 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 10:02, 3 December 2013
- Description: serine protease, cleaves SpoIVFA to prepare it for CtpB cleavage, this results in pro-SigK processing/activation in the mother-cell, does also cleave CtpB
Gene name | spoIVB |
Synonyms | |
Essential | no |
Product | serine protease |
Function | control of SigK activation |
Gene expression levels in SubtiExpress: spoIVB | |
Interactions involving this protein in SubtInteract: SpoIVB | |
MW, pI | 45 kDa, 8.842 |
Gene length, protein length | 1275 bp, 425 aa |
Immediate neighbours | spo0A, recN |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
sigma factors and their control, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU24230
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Self-cleaves 52-Val-|-Asn-53, 62-Ala-|-Phe-63 and 74-Val-|-Thr-75 at the N-terminus of SpoIVB (according to Swiss-Prot)
- Protein family: PDZ protease PubMed
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Effectors of protein activity:
- Localization:
- intracellular space between the mother cell and the forespore PubMed
Database entries
- Structure:
- UniProt: P17896
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIVB PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Simon Cutting, London, UK homepage
Your additional remarks
References
Markus Mastny, Alexander Heuck, Robert Kurzbauer, Anja Heiduk, Prisca Boisguerin, Rudolf Volkmer, Michael Ehrmann, Christopher D A Rodrigues, David Z Rudner, Tim Clausen
CtpB assembles a gated protease tunnel regulating cell-cell signaling during spore formation in Bacillus subtilis.
Cell: 2013, 155(3);647-58
[PubMed:24243021]
[WorldCat.org]
[DOI]
(I p)
Nathalie Campo, David Z Rudner
SpoIVB and CtpB are both forespore signals in the activation of the sporulation transcription factor sigmaK in Bacillus subtilis.
J Bacteriol: 2007, 189(16);6021-7
[PubMed:17557826]
[WorldCat.org]
[DOI]
(P p)
Thierry Doan, David Z Rudner
Perturbations to engulfment trigger a degradative response that prevents cell-cell signalling during sporulation in Bacillus subtilis.
Mol Microbiol: 2007, 64(2);500-11
[PubMed:17493131]
[WorldCat.org]
[DOI]
(P p)
Nathalie Campo, David Z Rudner
A branched pathway governing the activation of a developmental transcription factor by regulated intramembrane proteolysis.
Mol Cell: 2006, 23(1);25-35
[PubMed:16818230]
[WorldCat.org]
[DOI]
(P p)
Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325]
[WorldCat.org]
[DOI]
(P p)
Tran C Dong, Simon M Cutting
The PDZ domain of the SpoIVB transmembrane signaling protein enables cis-trans interactions involving multiple partners leading to the activation of the pro-sigmaK processing complex in Bacillus subtilis.
J Biol Chem: 2004, 279(42);43468-78
[PubMed:15292188]
[WorldCat.org]
[DOI]
(P p)
Qi Pan, Richard Losick, David Z Rudner
A second PDZ-containing serine protease contributes to activation of the sporulation transcription factor sigmaK in Bacillus subtilis.
J Bacteriol: 2003, 185(20);6051-6
[PubMed:14526016]
[WorldCat.org]
[DOI]
(P p)
Tran C Dong, Simon M Cutting
SpoIVB-mediated cleavage of SpoIVFA could provide the intercellular signal to activate processing of Pro-sigmaK in Bacillus subtilis.
Mol Microbiol: 2003, 49(5);1425-34
[PubMed:12940997]
[WorldCat.org]
[DOI]
(P p)
Ngo T Hoa, James A Brannigan, Simon M Cutting
The Bacillus subtilis signaling protein SpoIVB defines a new family of serine peptidases.
J Bacteriol: 2002, 184(1);191-9
[PubMed:11741860]
[WorldCat.org]
[DOI]
(P p)
N T Hoa, J A Brannigan, S M Cutting
The PDZ domain of the SpoIVB serine peptidase facilitates multiple functions.
J Bacteriol: 2001, 183(14);4364-73
[PubMed:11418578]
[WorldCat.org]
[DOI]
(P p)
P Wakeley, N T Hoa, S Cutting
BofC negatively regulates SpoIVB-mediated signalling in the Bacillus subtilis sigmaK-checkpoint.
Mol Microbiol: 2000, 36(6);1415-24
[PubMed:10931291]
[WorldCat.org]
[DOI]
(P p)
P R Wakeley, R Dorazi, N T Hoa, J R Bowyer, S M Cutting
Proteolysis of SpolVB is a critical determinant in signalling of Pro-sigmaK processing in Bacillus subtilis.
Mol Microbiol: 2000, 36(6);1336-48
[PubMed:10931284]
[WorldCat.org]
[DOI]
(P p)
M Gomez, S M Cutting
Expression of the Bacillus subtilis spoIVB gene is under dual sigma F/sigma G control.
Microbiology (Reading): 1996, 142 ( Pt 12);3453-7
[PubMed:9004507]
[WorldCat.org]
[DOI]
(P p)
I Bagyan, J Hobot, S Cutting
A compartmentalized regulator of developmental gene expression in Bacillus subtilis.
J Bacteriol: 1996, 178(15);4500-7
[PubMed:8755877]
[WorldCat.org]
[DOI]
(P p)
S Cutting, A Driks, R Schmidt, B Kunkel, R Losick
Forespore-specific transcription of a gene in the signal transduction pathway that governs Pro-sigma K processing in Bacillus subtilis.
Genes Dev: 1991, 5(3);456-66
[PubMed:1900494]
[WorldCat.org]
[DOI]
(P p)
B E Van Hoy, J A Hoch
Characterization of the spoIVB and recN loci of Bacillus subtilis.
J Bacteriol: 1990, 172(3);1306-11
[PubMed:2106508]
[WorldCat.org]
[DOI]
(P p)