Difference between revisions of "TyrZ"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywaE]]'', ''[[ywaD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywaE]]'', ''[[ywaD]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38460 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38460 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:tyrZ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:tyrZ_context.gif]] |
Revision as of 11:36, 14 May 2013
- Description: tyrosyl-tRNA synthetase (minor)
Gene name | tyrZ |
Synonyms | ipa-9r, tyrS1, tyrT |
Essential | no |
Product | tyrosyl-tRNA synthetase (minor) |
Function | translation |
Gene expression levels in SubtiExpress: tyrZ | |
Metabolic function and regulation of this protein in SubtiPathways: tRNA charging | |
MW, pI | 46 kDa, 6.661 |
Gene length, protein length | 1239 bp, 413 aa |
Immediate neighbours | ywaE, ywaD |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38460
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) (according to Swiss-Prot) ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) (according to Swiss-Prot)
- Protein family: TyrS type 2 subfamily (according to Swiss-Prot), class-I aminoacyl-tRNA synthetase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated on Thr-311 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P25151
- KEGG entry: [3]
- E.C. number: 6.1.1.1
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
- Additional information:
Biological materials
- Mutant: QB53532 (aphA3), available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References