Difference between revisions of "TyrZ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywaE]]'', ''[[ywaD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywaE]]'', ''[[ywaD]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38460 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38460 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:tyrZ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:tyrZ_context.gif]]

Revision as of 11:36, 14 May 2013

  • Description: tyrosyl-tRNA synthetase (minor)

Gene name tyrZ
Synonyms ipa-9r, tyrS1, tyrT
Essential no
Product tyrosyl-tRNA synthetase (minor)
Function translation
Gene expression levels in SubtiExpress: tyrZ
Metabolic function and regulation of this protein in SubtiPathways:
tRNA charging
MW, pI 46 kDa, 6.661
Gene length, protein length 1239 bp, 413 aa
Immediate neighbours ywaE, ywaD
Sequences Protein DNA DNA_with_flanks
Genetic context
TyrZ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
TyrZ expression.png




























Categories containing this gene/protein

translation

This gene is a member of the following regulons

T-box

The gene

Basic information

  • Locus tag: BSU38460

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) (according to Swiss-Prot) ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) (according to Swiss-Prot)
  • Protein family: TyrS type 2 subfamily (according to Swiss-Prot), class-I aminoacyl-tRNA synthetase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated on Thr-311 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant: QB53532 (aphA3), available in the Stülke lab
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References