Difference between revisions of "DhbF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of the siderophore bacillibactin | |style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of the siderophore bacillibactin | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU31960 dhbF] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 263 kDa, 4.737 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 263 kDa, 4.737 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ybdZ]]'', ''[[dhbB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ybdZ]]'', ''[[dhbB]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31960 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31960 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31960 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:dhbF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:dhbF_context.gif]] | ||
Revision as of 13:45, 13 May 2013
- Description: involved in 2,3-dihydroxybenzoate biosynthesis
| Gene name | dhbF |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | biosynthesis of the siderophore bacillibactin |
| Gene expression levels in SubtiExpress: dhbF | |
| MW, pI | 263 kDa, 4.737 |
| Gene length, protein length | 7134 bp, 2378 aa |
| Immediate neighbours | ybdZ, dhbB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
acquisition of iron, iron metabolism, membrane proteins, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU31960
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ATP-dependent AMP-binding enzyme family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylation on Ser-988 AND Ser-996 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- membrane PubMed
Database entries
- Structure:
- UniProt: P45745
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. Mol Microbiol. 2011 81(6): 1459-1473. PubMed:21815947
