Difference between revisions of "CodY regulon"
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* ''[[bacG]]'' | * ''[[bacG]]'' | ||
* ''[[bcaP]]'' | * ''[[bcaP]]'' | ||
| − | |||
| − | |||
| − | |||
* ''[[bkdR]]'' | * ''[[bkdR]]'' | ||
| − | |||
* ''[[citB]]'' | * ''[[citB]]'' | ||
* ''[[clpQ]]'' | * ''[[clpQ]]'' | ||
| Line 62: | Line 58: | ||
* ''[[kapB]]'' | * ''[[kapB]]'' | ||
* ''[[kinB]]'' | * ''[[kinB]]'' | ||
| − | |||
* ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]'' | * ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]'' | ||
* ''[[phrA]]'' | * ''[[phrA]]'' | ||
* ''[[phrC]]'' | * ''[[phrC]]'' | ||
* ''[[phrE]]'' | * ''[[phrE]]'' | ||
| − | * ''[[ptb]]'' | + | * ''[[ptb]]-[[bcd]]-[[buk]]-[[lpdV]]-[[bkdAA]]-[[bkdAB]]-[[bkdB]]'' |
* ''[[putB]]-[[putC]]'' | * ''[[putB]]-[[putC]]'' | ||
* ''[[rapA]]'' | * ''[[rapA]]'' | ||
Revision as of 10:47, 9 January 2015
| Regulator | |
Contents
Genes in this regulon
Activation
Repression
- acsA
- amhX
- ansZ
- appA/1
- appA/2
- appB
- appC
- appD
- appF
- argC-argJ-argB-argD-carA-carB-argF
- asnH
- bacA
- bacB
- bacC
- bacD
- bacE
- bacF
- bacG
- bcaP
- bkdR
- citB
- clpQ
- clpY
- codV
- codY
- comK
- dppA
- dppB
- dppC
- dppD
- dppE
- flgB-flgC-fliE-fliF-fliG-fliH-fliI-fliJ-ylxF-fliK-flgD-flgE-fliL-fliM-fliY-cheY-fliZ-fliP-fliQ-fliR-flhB-flhA-flhF-flhG-cheB-cheA-cheW-cheC-cheD-sigD-swrB
- frlB-frlO-frlN-frlM-frlD
- gabP
- hag
- hom-thrC-thrB
- hutP-hutH-hutU-hutI-hutG-hutM
- ilvA-ypmP
- ilvB-ilvH-ilvC-leuA-leuB-leuC-leuD
- ilvD
- ispA
- kapB
- kinB
- nupN-nupO-nupP-nupQ
- phrA
- phrC
- phrE
- ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB
- putB-putC
- rapA
- rapC
- rapE
- rocA-rocB-rocC
- rocD-rocE-rocF
- srfAA-srfAB-comS-srfAC-srfAD
- ureA-ureB-ureC
- ybgE
- ycgA
- yhjC
- ykfA
- ykfB
- ykfC
- ykfD
- ylmA
- yoyD
- yuiA
- yuiB
- yuiC
- yurJ
- ywaA
- yxaM
- yxbA
- yxbB
- yxbC
- yxbD
- yxnB
Important publications on the CodY regulon
Shaun R Brinsmade, Elizabeth L Alexander, Jonathan Livny, Arion I Stettner, Daniel Segrè, Kyu Y Rhee, Abraham L Sonenshein
Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY.
Proc Natl Acad Sci U S A: 2014, 111(22);8227-32
[PubMed:24843172]
[WorldCat.org]
[DOI]
(I p)
Tobias Geiger, Christiane Wolz
Intersection of the stringent response and the CodY regulon in low GC Gram-positive bacteria.
Int J Med Microbiol: 2014, 304(2);150-5
[PubMed:24462007]
[WorldCat.org]
[DOI]
(I p)
Boris R Belitsky, Abraham L Sonenshein
Genome-wide identification of Bacillus subtilis CodY-binding sites at single-nucleotide resolution.
Proc Natl Acad Sci U S A: 2013, 110(17);7026-31
[PubMed:23569278]
[WorldCat.org]
[DOI]
(I p)
Boris R Belitsky, Abraham L Sonenshein
Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis.
J Bacteriol: 2008, 190(4);1224-36
[PubMed:18083814]
[WorldCat.org]
[DOI]
(I p)
Abraham L Sonenshein
Control of key metabolic intersections in Bacillus subtilis.
Nat Rev Microbiol: 2007, 5(12);917-27
[PubMed:17982469]
[WorldCat.org]
[DOI]
(I p)
Abraham L Sonenshein
CodY, a global regulator of stationary phase and virulence in Gram-positive bacteria.
Curr Opin Microbiol: 2005, 8(2);203-7
[PubMed:15802253]
[WorldCat.org]
[DOI]
(P p)
Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455]
[WorldCat.org]
[DOI]
(P p)
