Difference between revisions of "SinR"
(→Genes controlled by SinR) |
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[sinI]]-[[sinR]]'' {{PubMed|3125149}} | + | * '''Operon:''' |
| + | ** ''[[sinI]]-[[sinR]]'' {{PubMed|3125149}} | ||
| + | ** ''[[sinR]]'' {{PubMed|3125149}} | ||
| − | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|3125149}} | + | * '''[[Sigma factor]]:''' |
| + | ** ''[[sinI]]'': [[SigA]] {{PubMed|3125149}} | ||
| + | ** ''[[sinR]]'': [[SigA]] {{PubMed|3125149}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** repressed under conditions that trigger sporulation ([[Spo0A]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/11751836 PubMed] | + | ** ''[[sinI]]'': repressed under conditions that trigger sporulation ([[Spo0A]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/11751836 PubMed] |
| − | ** repressed during exponential growth ([[ScoC]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/1906467,11751836 PubMed] | + | ** ''[[sinI]]'': repressed during exponential growth ([[ScoC]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/1906467,11751836 PubMed] |
| − | ** repressed during logrithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7635837,11751836 PubMed] | + | ** ''[[sinI]]'': repressed during logrithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7635837,11751836 PubMed] |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
Revision as of 15:18, 27 January 2010
- Description: transcriptional regulator of post-exponential-phase responses genes
| Gene name | sinR |
| Synonyms | sin, flaD |
| Essential | no |
| Product | transcriptional regulator of post-exponential-phase responses genes |
| Function | regulation of post-exponential gene expression |
| Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
| MW, pI | 12 kDa, 7.177 |
| Gene length, protein length | 333 bp, 111 aa |
| Immediate neighbours | sinI, tasA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU24610
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): SlrR
Genes controlled by SinR
- Activation by SinR: comK
- Repression by SinR: aprE, epsA-epsB-epsC-epsD-epsE-epsF-epsG-epsH-epsI-epsJ-epsK-epsL-epsM-epsN-epsO PubMed,kinB, rapG PubMed, sigD, spo0A,spoIIAA-spoIIAB-sigF, spoIIE, spoIIGA-sigE-sigG, spoVG PubMed, yqxM-sipW-tasA PubMed, yvgN PubMed, ywbD PubMed
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Localization:
Database entries
- Structure: 1B0N (complex SinR-SinI)
- UniProt: P06533
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
