Difference between revisions of "YfhS"
(→Expression and regulation) |
|||
| Line 92: | Line 92: | ||
* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190}} | * '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190}} | ||
| − | * '''Regulation:''' expressed during sporulation ([[SigG]]) {{PubMed|15699190}} | + | * '''Regulation:''' |
| + | ** expressed late during sporulation in the forespore ([[SigG]]) {{PubMed|15699190}} | ||
| + | ** repressed during logarithmic phase ([[AbrB]]) {{PubMed|18840696}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[AbrB]]: transcription repression {{PubMed|18840696}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 117: | Line 120: | ||
=References= | =References= | ||
| − | + | <pubmed>10463184 15699190 18840696</pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 22:32, 11 December 2009
- Description: unknown
| Gene name | yfhS |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 8 kDa, 5.844 |
| Gene length, protein length | 222 bp, 74 aa |
| Immediate neighbours | yfhQ, fabL |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU08640
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O31585
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yfhS PubMed
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Allison V Banse, Arnaud Chastanet, Lilah Rahn-Lee, Errett C Hobbs, Richard Losick
Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis.
Proc Natl Acad Sci U S A: 2008, 105(40);15547-52
[PubMed:18840696]
[WorldCat.org]
[DOI]
(I p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Hiroki Yamamoto, Masao Mori, Junichi Sekiguchi
Transcription of genes near the sspE locus of the Bacillus subtilis genome.
Microbiology (Reading): 1999, 145 ( Pt 8);2171-2180
[PubMed:10463184]
[WorldCat.org]
[DOI]
(P p)
