Difference between revisions of "Spo0A"

From SubtiWiki
Jump to: navigation, search
Line 82: Line 82:
 
=== Database entries ===
 
=== Database entries ===
  
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1LQ1 1LQ1]
+
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1FC3 1FC3] (trans-activation domain, Geobacillus stearothermophilus),  [http://www.rcsb.org/pdb/explore.do?structureId=1LQ1 1LQ1]
  
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P06534 P06534]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P06534 P06534]

Revision as of 21:55, 5 May 2009

  • Description: two-component response regulator, initiation of sporulation

Gene name spo0A
Synonyms spo0C, spo0G, spoIIL, sof-1
Essential no
Product two-component response regulator
Function initiation of sporulation
MW, pI 29 kDa, 5.989
Gene length, protein length 801 bp, 267 aa
Immediate neighbours yqiG, spoIVB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Spo0A context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Genes controlled by Spo0A

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: receives phosphorylation from Spo0B, dephosphorylation by Spo0E
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure: 1FC3 (trans-activation domain, Geobacillus stearothermophilus), 1LQ1
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Tony Wilkinson, York University, U.K. homepage

Imrich Barak, Slovak Academy of Science, Bratislava, Slovakia homepage

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed