Difference between revisions of "TyrZ"
(→Extended information on the protein) |
|||
Line 101: | Line 101: | ||
* '''Operon:''' | * '''Operon:''' | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=tyrZ_3947158_3948399_1 tyrZ] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' ''[[tyrZ]]'' {{PubMed|1735721}} | ||
* '''Regulation:''' | * '''Regulation:''' |
Revision as of 09:14, 17 April 2012
- Description: tyrosyl-tRNA synthetase (minor)
Gene name | tyrZ |
Synonyms | ipa-9r, tyrS1, tyrT |
Essential | no |
Product | tyrosyl-tRNA synthetase (minor) |
Function | translation |
Metabolic function and regulation of this protein in SubtiPathways: tRNA charging | |
MW, pI | 46 kDa, 6.661 |
Gene length, protein length | 1239 bp, 413 aa |
Immediate neighbours | ywaE, ywaD |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38460
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) (according to Swiss-Prot) ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) (according to Swiss-Prot)
- Protein family: TyrS type 2 subfamily (according to Swiss-Prot), class-I aminoacyl-tRNA synthetase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated on Thr-311 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P25151
- KEGG entry: [3]
- E.C. number: 6.1.1.1
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
- Additional information:
Biological materials
- Mutant: QB53532 (aphA3), available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References