NcRNA/ other

Parent categories	6. Groups of genes 6.9. ncRNA
Neighbouring categories	6.9.1. Household RNA 6.9.2. ncRNA/ other
Related categories
Overview on the categories (Excel file) All genes and their categories (Excel file)

Genes in this functional category

regulatory RNAs

• fsrA
• roxS
• rrcM
• sr1
• SR4
• RnaC

antisense RNAs of toxin/antitoxin systems

• ratA
• as-bsrH
• as-yonT
• SR5

small RNAs with unknown functions

• bsrC
• bsrD
• bsrF
• bsrH
• bsrI
• csfG
• surA (for yndL)
• surC

Antisense RNAs were predicted for the following genes: PubMed

• bglP
• comER
• ggaA
• jag
• leuA
• mbl
• mtlD
• mutS
• nadB
• ndoA
• opuBD
• sda
• sigA
• wprA
• yddR
• ydiF
• yfhD
• yndL (surA)
• yoeA
• yoqZ
• yqzJ
• ytoA
• ytoI
• ywfM
• ywqA
• yyaQ

Additional noncoding RNAs were predicted for the following intergenic regions: PubMed

• yqaJ-yqaI
• yqaO-yqaN
• yndN-lexA
• ydcO-ydcP
• yolA-yokL
• yokC-yokB
• pbpG-ywhD
• stoA-zosA
• yobI-yobJ
• vmlR-ydgF
• yrzI-yrhG
• yfmI-yfmG
• hxlR-srfAA
• mutL-ymzD
• mntA-menC
• yopM-yopL
• yizD-yjbH
• pps-xynA
• yqdB-yqbM
• yugI-alaT
• trxA-xsa
• ykwD-pbpH
• ymzA-nrdI
• yvcI-trxB
• glmM-glmS
• yhaZ-yhaX
• yneK-cotM
• trpS-oppA
• gerPA-yisI

Reviews

Ruben A T Mars, Pierre Nicolas, Emma L Denham, Jan Maarten van Dijl
Regulatory RNAs in Bacillus subtilis: a Gram-Positive Perspective on Bacterial RNA-Mediated Regulation of Gene Expression.
Microbiol Mol Biol Rev: 2016, 80(4);1029-1057
[PubMed:27784798] [WorldCat.org] [DOI] (I e)

Sabine Brantl, Natalie Jahn
sRNAs in bacterial type I and type III toxin-antitoxin systems.
FEMS Microbiol Rev: 2015, 39(3);413-27
[PubMed:25808661] [WorldCat.org] [DOI] (I p)

Sabine Brantl, Reinhold Brückner
Small regulatory RNAs from low-GC Gram-positive bacteria.
RNA Biol: 2014, 11(5);443-56
[PubMed:24576839] [WorldCat.org] [DOI] (I p)

Sabine Brantl
Acting antisense: plasmid- and chromosome-encoded sRNAs from Gram-positive bacteria.
Future Microbiol: 2012, 7(7);853-71
[PubMed:22827307] [WorldCat.org] [DOI] (I p)

Jens Georg, Wolfgang R Hess
cis-antisense RNA, another level of gene regulation in bacteria.
Microbiol Mol Biol Rev: 2011, 75(2);286-300
[PubMed:21646430] [WorldCat.org] [DOI] (I p)

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)

Pascale Romby, Emmanuelle Charpentier
An overview of RNAs with regulatory functions in gram-positive bacteria.
Cell Mol Life Sci: 2010, 67(2);217-37
[PubMed:19859665] [WorldCat.org] [DOI] (I p)

Lauren S Waters, Gisela Storz
Regulatory RNAs in bacteria.
Cell: 2009, 136(4);615-28
[PubMed:19239884] [WorldCat.org] [DOI] (I p)

Sabine Brantl
Bacterial chromosome-encoded small regulatory RNAs.
Future Microbiol: 2009, 4(1);85-103
[PubMed:19207102] [WorldCat.org] [DOI] (I p)