RocC

• Description: amino acid permease
  
  

Gene name	rocC
Synonyms	ipa-78d
Essential	no
Product	amino acid permease
Function	arginine, ornithine and citrulline uptake
MW, pI	51 kDa, 8.41
Gene length, protein length	1410 bp, 470 aa
Immediate neighbours	ywfA, rocB
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

The gene

Basic information

• Coordinates:

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: amino acid-polyamine-organocation (APC) superfamily (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization: cell membrane (according to Swiss-Prot)

Database entries

• Structure:

• Swiss prot entry: P39636

• KEGG entry: BSU37760

• E.C. number:

Expression and regulation

• Operon: rocA-rocB-rocC PubMed

• Sigma factor: SigL PubMed

• Regulation: induction by arginine (RocR) PubMed, repressed by CodY PubMed

• Regulatory mechanism: CodY: transcription repression PubMed, RocR: transcription activation PubMed

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

1. Calogero S, Gardan R, Glaser P, Schweizer J, Rapoport G, Debarbouille M. (1994) RocR, a novel regulatory protein controlling arginine utilization in Bacillus subtilis, belongs to the NtrC/NifA family of transcriptional activators. J. Bacteriol. volume: page-page. PubMed
2. Author1, Author2 & Author3 (year) Title # Author1, Author2 & Author3 (year) Title Journal 176: 1234-1241. PubMed