Difference between revisions of "RecO"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
* '''Description:''' mediator of [[RecA]] binding to ssDNA <br/><br/>
+
* '''Description:''' mediator of [[RecA]] binding to ssDNA, required for the formation of [[RecA]] DNA repair centers <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 72: Line 72:
 
** provides [[RecA]] access to ssDNA during chromosomal transformation (together with [[DprA]]) {{PubMed|22373918}}
 
** provides [[RecA]] access to ssDNA during chromosomal transformation (together with [[DprA]]) {{PubMed|22373918}}
 
** catalyzes annealing of [[SsbA]] or [[SsbA]]/[[SsbB]] coated ssDNAs to allow the formation of DNA duplexes with tails during plasmid transformation {{PubMed|22373918}}
 
** catalyzes annealing of [[SsbA]] or [[SsbA]]/[[SsbB]] coated ssDNAs to allow the formation of DNA duplexes with tails during plasmid transformation {{PubMed|22373918}}
 +
** required for the formation of [[RecA]] DNA repair centers (together with [[RecR]]) {{PubMed|24891441}}
  
 
* '''Protein family:''' recO family (according to Swiss-Prot)
 
* '''Protein family:''' recO family (according to Swiss-Prot)
Line 148: Line 149:
 
<pubmed> 22933559 </pubmed>
 
<pubmed> 22933559 </pubmed>
 
== Original publications ==
 
== Original publications ==
<pubmed>,18599486, 19730681 20581116 22373918 17581636 21170359 24285298 24285298</pubmed>
+
<pubmed>24891441,18599486, 19730681 20581116 22373918 17581636 21170359 24285298 24285298</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:17, 4 June 2014

  • Description: mediator of RecA binding to ssDNA, required for the formation of RecA DNA repair centers

Gene name recO
Synonyms yqxN, yqfI
Essential no
Product mediator of RecA binding to ssDNA
Function DNA repair/ recombination
Gene expression levels in SubtiExpress: recO
Interactions involving this protein in SubtInteract: RecO
MW, pI 29 kDa, 8.208
Gene length, protein length 765 bp, 255 aa
Immediate neighbours glyQ, yqzL
Sequences Protein DNA DNA_with_flanks
Genetic context
RecO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RecO expression.png















Categories containing this gene/protein

DNA repair/ recombination

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU25280

Phenotypes of a mutant

  • drastically reduced survival of mature dormant spores after exposure to ultrahigh vacuum desiccation and ionizing radiation that induce single strand (ss) DNA nicks and double-strand breaks (DSBs) PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • provides RecA access to ssDNA during chromosomal transformation (together with DprA) PubMed
    • catalyzes annealing of SsbA or SsbA/SsbB coated ssDNAs to allow the formation of DNA duplexes with tails during plasmid transformation PubMed
    • required for the formation of RecA DNA repair centers (together with RecR) PubMed
  • Protein family: recO family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:
    • cytoplasm (according to Swiss-Prot)
    • localizes to the DNA entry pole during transformation PubMed

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications