Difference between revisions of "TrmB"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU29900&redirect=T BSU29900] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ytmQ.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ytmQ.html] | ||
| Line 93: | Line 94: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU29900&redirect=T BSU29900] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2FCA 2FCA] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2FCA 2FCA] | ||
Revision as of 14:32, 2 April 2014
- Description: tRNA (m7G46) methyltransferase
| Gene name | trmB |
| Synonyms | ytmQ |
| Essential | no |
| Product | tRNA (m7G46) methyltransferase |
| Function | tRNA modification |
| Gene expression levels in SubtiExpress: trmB | |
| MW, pI | 24 kDa, 6.351 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | ytnP, ytzH |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU29900
Phenotypes of a mutant
Database entries
- BsubCyc: BSU29900
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N(7)-methylguanine (according to Swiss-Prot)
- Protein family: TrmB family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU29900
- Structure: 2FCA
- UniProt: O34522
- KEGG entry: [3]
- E.C. number: 2.1.1.33
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
