Difference between revisions of "AmyE"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03040&redirect=T BSU03040] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/amyE.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/amyE.html] | ||
| Line 92: | Line 93: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03040&redirect=T BSU03040] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1BAG 1BAG] (complex with maltopentaose) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1BAG 1BAG] (complex with maltopentaose) | ||
Revision as of 12:56, 2 April 2014
- Description: alpha-amylase
| Gene name | amyE |
| Synonyms | amyA |
| Essential | no |
| Product | alpha-amylase) |
| Function | starch degradation |
| Gene expression levels in SubtiExpress: amyE | |
| Metabolic function and regulation of this protein in SubtiPathways: amyE | |
| MW, pI | 72 kDa, 5.85 |
| Gene length, protein length | 1980 bp, 660 aa |
| Immediate neighbours | ycgB, ldh |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03040
Phenotypes of a mutant
Database entries
- BsubCyc: BSU03040
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in oligosaccharides and polysaccharides (according to Swiss-Prot)
- Protein family: glycosyl hydrolase 13 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: secreted (according to Swiss-Prot), extracellular (signal peptide) PubMed
Database entries
- BsubCyc: BSU03040
- Structure: 1BAG (complex with maltopentaose)
- UniProt: P00691
- KEGG entry: [3]
- E.C. number: 3.2.1.1
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant: GP550 (cat), available in Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
