YaaK

• Description: unknown
  
  

Gene name	yaaK
Synonyms
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: yaaK
MW, pI	11 kDa, 4.536
Gene length, protein length	321 bp, 107 aa
Immediate neighbours	dnaX, recR
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

proteins of unknown function

The gene

Basic information

• Locus tag: BSU00200

Database entries

• BsubCyc: BSU00200

• DBTBS entry: no entry

• SubtiList entry: [1]

Additional information

• The E.coli homolog: ybaB

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: UPF0133 family (according to Swiss-Prot)

• Paralogous protein(s):

• The corresponding gene in E. coli: EcoliWiki PubMed

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• BsubCyc: BSU00200

• Structure:

• UniProt: P24281

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: yaaK PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Anne E Cooley, Sean P Riley, Keith Kral, M Clarke Miller, Edward DeMoll, Michael G Fried, Brian Stevenson
DNA-binding by Haemophilus influenzae and Escherichia coli YbaB, members of a widely-distributed bacterial protein family.
BMC Microbiol: 2009, 9;137
[PubMed:19594923] [WorldCat.org] [DOI] (I e)

G Hambraeus, C von Wachenfeldt, L Hederstedt
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs.
Mol Genet Genomics: 2003, 269(5);706-14
[PubMed:12884008] [WorldCat.org] [DOI] (P p)