Difference between revisions of "CspB"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
{{SubtiWiki category|[[RNA chaperones]]}}, | {{SubtiWiki category|[[RNA chaperones]]}}, | ||
| − | {{SubtiWiki category|[[cold stress proteins]]}} | + | {{SubtiWiki category|[[cold stress proteins]]}}, |
| + | [[most abundant proteins]] | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cspB_984262_984465_-1 cspB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cspB_984262_984465_-1 cspB] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigA]] {{PubMed|1400185}} | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|1400185}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' subject to Clp-dependent proteolysis upon glucose starvation {{PubMed|17981983}} | + | * '''Additional information:''' |
| + | ** subject to Clp-dependent proteolysis upon glucose starvation {{PubMed|17981983}} | ||
| + | ** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}} | ||
=Biological materials = | =Biological materials = | ||
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=References= | =References= | ||
| − | <pubmed>12399512,12171653,11752341,11717297,12838604,8321288,8321289,9533624,9379903,8294017,8755892,9914312,11591689,7476164,1409560,16352840,9920884,1400185,12427936,8307174,7703860,16352840, 22128343 23199363 21124848</pubmed> | + | <pubmed>12399512,12171653,11752341,11717297,12838604,8321288,8321289,9533624,9379903,8294017,8755892,9914312, 11591689,7476164,1409560,16352840,9920884,1400185,12427936,8307174,7703860,16352840, 22128343 23199363 15378759 21124848</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 13:01, 5 March 2014
- Description: major cold-shock protein
| Gene name | cspB |
| Synonyms | |
| Essential | no |
| Product | major cold-shock protein |
| Function | RNA chaperone |
| Gene expression levels in SubtiExpress: cspB | |
| Interactions involving this protein in SubtInteract: CspB | |
| MW, pI | 7 kDa, 4.341 |
| Gene length, protein length | 201 bp, 67 aa |
| Immediate neighbours | yhcI, yhcJ |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
RNA chaperones, cold stress proteins, most abundant proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09100
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot), cytoplasma, colocalizes with the ribosomes PubMed
Database entries
- UniProt: P32081
- KEGG entry: [3]
- E.C. number:
Additional information
- subject to Clp-dependent proteolysis upon glucose starvation PubMed
Expression and regulation
- Operon: cspB PubMed
- Regulation:
- induced upon cold shock PubMed
- Regulatory mechanism:
- Additional information:
- subject to Clp-dependent proteolysis upon glucose starvation PubMed
- belongs to the 100 most abundant proteins PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system: B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Stülke lab
- Antibody:
Labs working on this gene/protein
Mohamed Marahiel, Marburg University, Germany homepage
Your additional remarks
References
