Difference between revisions of "TapA"
(→Biological materials) |
|||
Line 58: | Line 58: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
− | + | * no biofilm formation {{PubMed|24488317}} | |
− | |||
=== Database entries === | === Database entries === | ||
Line 91: | Line 90: | ||
* '''Cofactor(s):''' | * '''Cofactor(s):''' | ||
− | * '''Effectors of protein activity:''' | + | * '''Effectors of protein activity:''' |
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
− | ** [[TapA]]-[[TasA]] {{PubMed| | + | ** [[TapA]]-[[TasA]] {{PubMed|24488317}} |
** [[SipW]]-[[TapA]] {{PubMed|10559173}} | ** [[SipW]]-[[TapA]] {{PubMed|10559173}} | ||
Line 160: | Line 159: | ||
<pubmed> 21488983 </pubmed> | <pubmed> 21488983 </pubmed> | ||
==Original publications== | ==Original publications== | ||
− | <pubmed>18430133,18047568,18647168, 20351052,16430695,10464223,17720793, 19605685 20431016 10559173 21477127 21856853 21815947 23646920</pubmed> | + | <pubmed>18430133,18047568,18647168, 20351052,16430695,10464223,17720793, 19605685 20431016 10559173 21477127 21856853 21815947 23646920 24488317</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 17:23, 6 February 2014
- Description: required for the anchoring of the TasA amyloid fibers to the cell and for the initiation of fiber polymerization, minor fiber component
Gene name | tapA |
Synonyms | yqhD, yqxM |
Essential | no |
Product | TasA anchoring/assembly protein |
Function | biofilm formation |
Gene expression levels in SubtiExpress: tapA | |
Interactions involving this protein in SubtInteract: TapA | |
Regulation of this protein in SubtiPathways: tapA | |
MW, pI | 28 kDa, 6.677 |
Gene length, protein length | 759 bp, 253 aa |
Immediate neighbours | sipW, yqzG |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
biofilm formation, membrane proteins
This gene is a member of the following regulons
AbrB regulon, RemA regulon, SinR regulon
The gene
Basic information
- Locus tag: BSU24640
Phenotypes of a mutant
- no biofilm formation PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P40949
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- GFP fusion:
- YFP fusion: GP1537 lacA::p(tapA-yfp ermC), available in Stülke lab
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Adam Driks
Tapping into the biofilm: insights into assembly and disassembly of a novel amyloid fibre in Bacillus subtilis.
Mol Microbiol: 2011, 80(5);1133-6
[PubMed:21488983]
[WorldCat.org]
[DOI]
(I p)
Original publications