Difference between revisions of "SdpB"
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| − | * '''Description:''' membrane protein <br/><br/> | + | * '''Description:''' membrane protein, required for [[SdpC]] toxin maturation <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Product''' || unknown | |style="background:#ABCDEF;" align="center"| '''Product''' || unknown | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || maturation of the [[SdpC]] toxin |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33760 sdpB] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33760 sdpB] | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sdpB_3464762_3465733_1 sdpB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sdpB_3464762_3465733_1 sdpB] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
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<pubmed>20955377 </pubmed> | <pubmed>20955377 </pubmed> | ||
==Original Publications== | ==Original Publications== | ||
| − | + | <pubmed>12817086,,14651647,15687200,15743949,15687200,17720793, 18763711 23687264 21815947 23033921</pubmed> | |
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| − | <pubmed>12817086,,14651647,15687200,15743949,15687200,17720793, 18763711 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:07, 27 May 2013
- Description: membrane protein, required for SdpC toxin maturation
| Gene name | sdpB |
| Synonyms | yvaX |
| Essential | no |
| Product | unknown |
| Function | maturation of the SdpC toxin |
| Gene expression levels in SubtiExpress: sdpB | |
| MW, pI | 37 kDa, 9.521 |
| Gene length, protein length | 969 bp, 323 aa |
| Immediate neighbours | sdpA, sdpC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
toxins, antitoxins and immunity against toxins, membrane proteins
This gene is a member of the following regulons
AbrB regulon, Rok regulon, Spo0A regulon
The gene
Basic information
- Locus tag: BSU33760
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- Structure:
- UniProt: O34616
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
José Eduardo González-Pastor
Cannibalism: a social behavior in sporulating Bacillus subtilis.
FEMS Microbiol Rev: 2011, 35(3);415-24
[PubMed:20955377]
[WorldCat.org]
[DOI]
(I p)
Original Publications
