YabC

• Description: similar to 16S rRNA methyltransferase
  
  

Gene name	yabC
Synonyms
Essential	no
Product	16S rRNA methyltransferase
Function	rRNA modification
Gene expression levels in SubtiExpress: yabC
MW, pI	32 kDa, 5.518
Gene length, protein length	876 bp, 292 aa
Immediate neighbours	yazA, abrB
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

translation

The gene

Basic information

• Locus tag: BSU00360

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

Additional information

• The E.coli homolog: rsmI

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: UPF0011 family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P37544

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: yabC PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Satoshi Kimura, Tsutomu Suzuki
Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA.
Nucleic Acids Res: 2010, 38(4);1341-52
[PubMed:19965768] [WorldCat.org] [DOI] (I p)