Difference between revisions of "GerBA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] response to the combination of glucose, fructose, and KCl | |style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] response to the combination of glucose, fructose, and KCl | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35800 gerBA] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GerBA GerBA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GerBA GerBA] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pmi]]'', ''[[gerBB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pmi]]'', ''[[gerBB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35800 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35800 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35800 Advanced_DNA] |
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Revision as of 14:00, 13 May 2013
- Description: nutrient receptor, germination response to the combination of glucose, fructose, and KCl
| Gene name | gerBA |
| Synonyms | |
| Essential | no |
| Product | nutrient receptor |
| Function | germination response to the combination of glucose, fructose, and KCl |
| Gene expression levels in SubtiExpress: gerBA | |
| Interactions involving this protein in SubtInteract: GerBA | |
| MW, pI | 53 kDa, 7.295 |
| Gene length, protein length | 1446 bp, 482 aa |
| Immediate neighbours | pmi, gerBB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35800
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: gerABKA family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- spore inner membrane PubMed
Database entries
- Structure:
- UniProt: P39569
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Jing-qiao Zhang, Keren K Griffiths, Ann Cowan, Peter Setlow, Ji Yu
Expression level of Bacillus subtilis germinant receptors determines the average rate but not the heterogeneity of spore germination.
J Bacteriol: 2013, 195(8);1735-40
[PubMed:23396907]
[WorldCat.org]
[DOI]
(I p)
Keren K Griffiths, Jingqiao Zhang, Ann E Cowan, Ji Yu, Peter Setlow
Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster.
Mol Microbiol: 2011, 81(4);1061-77
[PubMed:21696470]
[WorldCat.org]
[DOI]
(I p)
Swaroopa Atluri, Katerina Ragkousi, Donna E Cortezzo, Peter Setlow
Cooperativity between different nutrient receptors in germination of spores of Bacillus subtilis and reduction of this cooperativity by alterations in the GerB receptor.
J Bacteriol: 2006, 188(1);28-36
[PubMed:16352818]
[WorldCat.org]
[DOI]
(P p)
Takao Igarashi, Peter Setlow
Interaction between individual protein components of the GerA and GerB nutrient receptors that trigger germination of Bacillus subtilis spores.
J Bacteriol: 2005, 187(7);2513-8
[PubMed:15774895]
[WorldCat.org]
[DOI]
(P p)
Rosa-Martha Cabrera-Martinez, Federico Tovar-Rojo, Venkata Ramana Vepachedu, Peter Setlow
Effects of overexpression of nutrient receptors on germination of spores of Bacillus subtilis.
J Bacteriol: 2003, 185(8);2457-64
[PubMed:12670969]
[WorldCat.org]
[DOI]
(P p)
M Paidhungat, P Setlow
Localization of a germinant receptor protein (GerBA) to the inner membrane of Bacillus subtilis spores.
J Bacteriol: 2001, 183(13);3982-90
[PubMed:11395462]
[WorldCat.org]
[DOI]
(P p)
M Paidhungat, P Setlow
Isolation and characterization of mutations in Bacillus subtilis that allow spore germination in the novel germinant D-alanine.
J Bacteriol: 1999, 181(11);3341-50
[PubMed:10348844]
[WorldCat.org]
[DOI]
(P p)
B M Corfe, A Moir, D Popham, P Setlow
Analysis of the expression and regulation of the gerB spore germination operon of Bacillus subtilis 168.
Microbiology (Reading): 1994, 140 ( Pt 11);3079-83
[PubMed:7812448]
[WorldCat.org]
[DOI]
(P p)
B M Corfe, R L Sammons, D A Smith, C Mauël
The gerB region of the Bacillus subtilis 168 chromosome encodes a homologue of the gerA spore germination operon.
Microbiology (Reading): 1994, 140 ( Pt 3);471-8
[PubMed:8012571]
[WorldCat.org]
[DOI]
(P p)
