Difference between revisions of "RhaA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || rhamnose utilization | |style="background:#ABCDEF;" align="center"|'''Function''' || rhamnose utilization | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU31180 yulE] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 5.351 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 5.351 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yulF]]'', ''[[yulD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yulF]]'', ''[[yulD]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31180 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31180 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31180 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yulE_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yulE_context.gif]] | ||
Revision as of 13:42, 13 May 2013
- Description: L-rhamnose isomerase
| Gene name | yulE |
| Synonyms | |
| Essential | no |
| Product | L-rhamnose isomerase |
| Function | rhamnose utilization |
| Gene expression levels in SubtiExpress: yulE | |
| MW, pI | 48 kDa, 5.351 |
| Gene length, protein length | 1272 bp, 424 aa |
| Immediate neighbours | yulF, yulD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU31180
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: L-rhamnose = L-rhamnulose (according to Swiss-Prot)
- Protein family: rhamnose isomerase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O05264
- KEGG entry: [2]
- E.C. number: 5.3.1.14
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
M S Turner, J D Helmann
Mutations in multidrug efflux homologs, sugar isomerases, and antimicrobial biosynthesis genes differentially elevate activity of the sigma(X) and sigma(W) factors in Bacillus subtilis.
J Bacteriol: 2000, 182(18);5202-10
[PubMed:10960106]
[WorldCat.org]
[DOI]
(P p)
