Difference between revisions of "CspB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || RNA chaperone | |style="background:#ABCDEF;" align="center"|'''Function''' || RNA chaperone | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU09100 cspB] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CspB CspB] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CspB CspB] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhcI]]'', ''[[yhcJ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhcI]]'', ''[[yhcJ]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU09100 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU09100 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU09100 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:cspB_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:cspB_context.gif]] | ||
Revision as of 12:25, 13 May 2013
- Description: major cold-shock protein
| Gene name | cspB |
| Synonyms | |
| Essential | no |
| Product | major cold-shock protein |
| Function | RNA chaperone |
| Gene expression levels in SubtiExpress: cspB | |
| Interactions involving this protein in SubtInteract: CspB | |
| MW, pI | 7 kDa, 4.341 |
| Gene length, protein length | 201 bp, 67 aa |
| Immediate neighbours | yhcI, yhcJ |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
RNA chaperones, cold stress proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09100
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot), cytoplasma, colocalizes with the ribosomes PubMed
Database entries
- UniProt: P32081
- KEGG entry: [3]
- E.C. number:
Additional information
- subject to Clp-dependent proteolysis upon glucose starvation PubMed
Expression and regulation
- Operon: cspB PubMed
- Regulation:
- induced upon cold shock PubMed
- Regulatory mechanism:
- Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system: B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Stülke lab
- Antibody:
Labs working on this gene/protein
Mohamed Marahiel, Marburg University, Germany homepage
Your additional remarks
References
Additional publications: PubMed
