Difference between revisions of "LiaF"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
* '''Description:''' negative effector of [[LiaR]] <br/><br/>
+
* '''Description:''' inhibitor of [[LiaS]] kinase activity <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || negative effector of [[LiaR]]  
+
|style="background:#ABCDEF;" align="center"| '''Product''' || negative effector of [[LiaS]]  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[LiaR]] activity
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[LiaR]] activity
Line 35: Line 35:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
Line 65: Line 61:
  
 
=== Additional information===
 
=== Additional information===
 
 
  
  
Line 74: Line 68:
  
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
 +
** inhibitor of [[LiaS]] kinase activity, maintains [[LiaS]] in the phosphatase state in the absence of the stress signal {{PubMed|23279150}}
  
 
* '''Protein family:'''
 
* '''Protein family:'''
Line 149: Line 144:
 
=References=
 
=References=
 
'''Additional publications:''' {{PubMed|22092710}}
 
'''Additional publications:''' {{PubMed|22092710}}
<pubmed>19164152, 20639339,15273097,17660417,16816187,15101989,17660417,16816187 </pubmed>
+
<pubmed>19164152, 20639339,15273097,17660417,16816187,15101989,17660417,16816187 23279150 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:31, 3 January 2013

  • Description: inhibitor of LiaS kinase activity

Gene name liaF
Synonyms yvqF
Essential no
Product negative effector of LiaS
Function control of LiaR activity
Gene expression levels in SubtiExpress: liaF
MW, pI 26 kDa, 9.211
Gene length, protein length 723 bp, 241 aa
Immediate neighbours liaS, liaG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvqF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
LiaF expression.png















Categories containing this gene/protein

transcription factors and their control, resistance against oxidative and electrophile stress, resistance against toxins/ antibiotics, membrane proteins

This gene is a member of the following regulons

LiaR regulon

The gene

Basic information

  • Locus tag: BSU33100

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • inhibitor of LiaS kinase activity, maintains LiaS in the phosphatase state in the absence of the stress signal PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed