Difference between revisions of "YndE"

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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:''' cell membrane (according to Swiss-Prot)
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* '''[[Localization]]:'''
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** cell membrane (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yndE_1909086_1910177_1 yndE] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yndE_1909086_1910177_1 yndE] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigG]] {{PubMed|15699190,16497325}}
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* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190,16497325}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 19:42, 15 December 2012

  • Description: similar to spore germination protein

Gene name yndE
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yndE
MW, pI 40 kDa, 9.092
Gene length, protein length 1089 bp, 363 aa
Immediate neighbours yndD, yndF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
File:YndE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YndE expression.png















Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU17760

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References