Difference between revisions of "ScoC"
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* '''Mutant:''' | * '''Mutant:''' | ||
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* '''lacZ fusion:''' | * '''lacZ fusion:''' |
Revision as of 20:32, 6 September 2011
- Description: transcriptional repressor of genes expressed in the transition phase
Gene name | scoC |
Synonyms | hpr, catA |
Essential | no |
Product | transcriptional repressor (MarR family) |
Function | transition state regulator |
Interactions involving this protein in SubtInteract: ScoC | |
Regulation of this protein in SubtiPathways: Biofilm, Alternative nitrogen sources | |
MW, pI | 23 kDa, 5.188 |
Gene length, protein length | 609 bp, 203 aa |
Immediate neighbours | yhaI, yhaH |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
transcription factors and their control, transition state regulators
This gene is a member of the following regulons
AbrB regulon, SalA regulon, SenS regulon
The ScoC regulon
The gene
Basic information
- Locus tag: BSU09990
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 2FXA
- UniProt: P11065
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: scoC PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector: for expression, purification in E. coli with N-terminal His-tag, pRSETA available in Gerth lab
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References