Difference between revisions of "LiaH"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
(Expression and regulation)
Line 105: Line 105:
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 
** induced by bacitracin ([[LiaR]]) {{PubMed|16816187}}
 
** induced by bacitracin ([[LiaR]]) {{PubMed|16816187}}
** repressed during logarithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/15101989,17660417 PubMed], probably indirect regulation by [[AbrB]] {{PubMed|20817675}}
+
** repressed during logarithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/15101989,17660417 PubMed], indirect regulation by [[AbrB]] {{PubMed|20817675}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  

Revision as of 17:14, 30 May 2011

  • Description: resistance against oxidative stress and cell wall antibiotics (such as daptamycin)

Gene name liaH
Synonyms yvqH
Essential no
Product unknown
Function resistance against oxidative stress and cell wall antibiotics
MW, pI 25 kDa, 6.172
Gene length, protein length 675 bp, 225 aa
Immediate neighbours liaG, liaI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvqH context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

resistance against oxidative and electrophile stress, resistance against toxins/ antibiotics

This gene is a member of the following regulons

AbrB regulon, LiaR regulon

The gene

Basic information

  • Locus tag: BSU33120

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: pspA/IM30 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions: forms large oligomeric rings with a nine-fold rotational symmetry PubMed
  • Localization: variable (spotty) protein PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References