Difference between revisions of "TasA"

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* '''Description:''' major component of biofilm matrix, forms amyloid fibers<br/><br/>
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=[http://ewefobyme.co.cc UNDER COSTRUCTION, PLEASE SEE THIS POST IN RESERVE COPY]=
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=[http://ewefobyme.co.cc CLICK HERE]=
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* '''Description:''' major component of biofilm matrix, forms amyloid fibers&lt;br/>&lt;br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[biofilm formation]]  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || [[biofilm formation]]  
 
|-
 
|-
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm]'''
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: &lt;br/>[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm]'''
 
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|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 5.442   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 5.442   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sinR]]'', ''[[sipW]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sinR]]'', ''[[sipW]]''
 
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|-
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14393&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&amp;#91;EMBLCDS:CAB14393&amp;#93;+-newId sequences] &lt;br/> (Barbe ''et al.'', 2009)'''
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:tasA_context.gif]]
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|colspan="2" | '''Genetic context''' &lt;br/> [[Image:tasA_context.gif]]
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  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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  &lt;div align="right"> &lt;small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]&lt;/small>&lt;/div>
 
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|-
 
|}
 
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__TOC__
 
__TOC__
  
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<br/><br/><br/><br/><br/><br/>
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&lt;br/>&lt;br/>&lt;br/>&lt;br/>&lt;br/>&lt;br/>
  
 
=The gene=
 
=The gene=
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=References=
 
=References=
 
==Reviews==
 
==Reviews==
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<pubmed>20735481 20351052 </pubmed>
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&lt;pubmed>20735481 20351052 &lt;/pubmed>
  
 
==Original publications==
 
==Original publications==
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<pubmed>18047568,16430695,16430696,10368135,18430133,,18647168 ,10464223,17720793,18957862 12107147 18763711, 20080671 </pubmed>
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&lt;pubmed>18047568,16430695,16430696,10368135,18430133,,18647168 ,10464223,17720793,18957862 12107147 18763711, 20080671 &lt;/pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 23:55, 23 November 2010

UNDER COSTRUCTION, PLEASE SEE THIS POST IN RESERVE COPY

CLICK HERE

  • Description: major component of biofilm matrix, forms amyloid fibers<br/><br/>
Gene name tasA
Synonyms cotN, yqhF
Essential no
Product major component of biofilm matrix
Function biofilm formation
Regulation of this protein in SubtiPathways: <br/>Biofilm
MW, pI 28 kDa, 5.442
Gene length, protein length 783 bp, 261 aa
Immediate neighbours sinR, sipW
Get the DNA and protein sequences <br/> (Barbe et al., 2009)
Genetic context <br/> TasA context.gif 
<div align="right"> <small>This image was kindly provided by SubtiList</small></div>

<br/><br/><br/><br/><br/><br/>

The gene

Basic information

  • Locus tag: BSU24620

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: forms amyloid fibers that bind cells together in the biofilm PubMed
  • Protein family: peptidase M73 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions: forms fibers of variable length and 10-15 nm in width PubMed
  • Localization: extracellular (signal peptide) PubMed, membrane PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

<pubmed>20735481 20351052 </pubmed>

Original publications

<pubmed>18047568,16430695,16430696,10368135,18430133,,18647168 ,10464223,17720793,18957862 12107147 18763711, 20080671 </pubmed>

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