Difference between revisions of "PbpE"
| Line 87: | Line 87: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[pbpE]]-[[racX]]'' {{PubMed|8491712}} | ||
| − | + | * '''[[Sigma factor]]:''' [[SigW]] {{PubMed|8491712,12207695}} | |
| − | |||
| − | * '''[[Sigma factor]]:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
** repressed during logrithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7592498 PubMed] | ** repressed during logrithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/7592498 PubMed] | ||
| + | ** induced by cell wall stress ([[SigW]]) {{PubMed|8491712,12207695}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 120: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>8491712,12533473,9987136,19063962,12884008,,7592498, </pubmed> | + | <pubmed>8491712,12533473,9987136,19063962,12884008,12207695,7592498, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:56, 30 December 2009
- Description: penicillin-binding protein PBP 4* (spore cortex)
| Gene name | pbpE |
| Synonyms | |
| Essential | no |
| Product | penicillin-binding protein PBP 4* (spore cortex) |
| Function | endopeptidase |
| MW, pI | 51 kDa, 4.835 |
| Gene length, protein length | 1353 bp, 451 aa |
| Immediate neighbours | racX, sacB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU34440
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: beta-lactamase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P32959
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information: the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
