Difference between revisions of "YydF"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[yydF]]-[[yydG]]-[[yydH]]-[[yydI]]-[[yydJ]]'' | + | * '''Operon:''' ''[[yydF]]-[[yydG]]-[[yydH]]-[[yydI]]-[[yydJ]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17921301 PubMed] |
| − | * '''Sigma factor:''' [[SigA]] | + | * '''Sigma factor:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/17921301 PubMed] |
| − | * '''Regulation:''' activated after transition to stationary phase([[AbrB]]) | + | * '''Regulation:''' activated after transition to stationary phase([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17921301 PubMed] |
| − | * '''Regulatory mechanism:''' [[AbrB]]: transcription repression | + | * '''Regulatory mechanism:''' [[AbrB]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/17921301 PubMed] |
| − | * '''Additional information:''' the ''yydF'' portion of the mRNA belongs to the most stable mRNAs in ''B. subtilis'' | + | * '''Additional information:''' the ''yydF'' portion of the mRNA belongs to the most stable mRNAs in ''B. subtilis'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17921301 PubMed] |
=Biological materials = | =Biological materials = | ||
Revision as of 17:38, 6 March 2009
- Description: write here
| Gene name | yydF |
| Synonyms | |
| Essential | no |
| Product | |
| Function | unknown |
| MW, pI | 5 kDa, 9.567 |
| Gene length, protein length | 147 bp, 49 aa |
| Immediate neighbours | yydG, fbp |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Additional information: the yydF portion of the mRNA belongs to the most stable mRNAs in B. subtilis PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
