Difference between revisions of "IolW"
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yvaA_3444329_3445405_1 iolW] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yvaA_3444329_3445405_1 iolW] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | + | * '''[[Sigma factor]]:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
| − | <pubmed>15805528, 20133360 24325193 </pubmed> | + | <pubmed>15805528, 20133360 24325193 25019153 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:39, 16 July 2014
- Description: scyllo-inositol dehydrogenase, general stress protein
| Gene name | yvaA |
| Synonyms | |
| Essential | no |
| Product | scyllo-inositol dehydrogenase |
| Function | unknown |
| Gene expression levels in SubtiExpress: iolW | |
| MW, pI | 39 kDa, 5.457 |
| Gene length, protein length | 1074 bp, 358 aa |
| Immediate neighbours | csoR, azoR2 |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources, general stress proteins (controlled by SigB)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU33530
Phenotypes of a mutant
Database entries
- BsubCyc: BSU33530
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: gfo/idh/mocA family (according to Swiss-Prot)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU33530
- Structure: 3GFG
- UniProt: O32223
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium): 313 PubMed
- number of protein molecules per cell (complex medium with amino acids, without glucose): 1480 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 5476 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 3799 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 6429 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Kosei Tanaka, Shintaro Tajima, Shinji Takenaka, Ken-ichi Yoshida
An improved Bacillus subtilis cell factory for producing scyllo-inositol, a promising therapeutic agent for Alzheimer's disease.
Microb Cell Fact: 2013, 12;124
[PubMed:24325193]
[WorldCat.org]
[DOI]
(I e)
Tetsuro Morinaga, Hitoshi Ashida, Ken-Ichi Yoshida
Identification of two scyllo-inositol dehydrogenases in Bacillus subtilis.
Microbiology (Reading): 2010, 156(Pt 5);1538-1546
[PubMed:20133360]
[WorldCat.org]
[DOI]
(I p)
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
