Difference between revisions of "YpqE"
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypqE_2336933_2337439_-1 ypqE] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypqE_2336933_2337439_-1 ypqE] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
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=Biological materials = | =Biological materials = | ||
| − | * '''Mutant:''' QB6099 (aphA3), available in the [[Stülke]] lab | + | * '''Mutant:''' |
| + | ** QB6099 (aphA3), available in [[Jörg Stülke]]'s lab {{PubMed|10627040}} | ||
| + | ** BKE22230 (''ypqE''::''ermC'') (available at the [http://www.bgsc.org/ BGSC] and in [[Jörg Stülke]]'s lab) | ||
* '''Expression vector:''' | * '''Expression vector:''' | ||
Revision as of 17:01, 11 June 2014
- Description: similar to PTS, EIIA component
| Gene name | ypqE |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ypqE | |
| MW, pI | 17 kDa, 5.294 |
| Gene length, protein length | 504 bp, 168 aa |
| Immediate neighbours | yprA, ypqA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
phosphotransferase systems, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU22230
Phenotypes of a mutant
Database entries
- BsubCyc: BSU22230
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions: YpqE-HPr (putative)
Database entries
- BsubCyc: BSU22230
- Structure:
- UniProt: P50829
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- QB6099 (aphA3), available in Jörg Stülke's lab PubMed
- BKE22230 (ypqE::ermC) (available at the BGSC and in Jörg Stülke's lab)
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Jonathan Reizer, Steffi Bachem, Aiala Reizer, Maryvonne Arnaud, Milton H Saier, Jörg Stülke
Novel phosphotransferase system genes revealed by genome analysis - the complete complement of PTS proteins encoded within the genome of Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 12);3419-3429
[PubMed:10627040]
[WorldCat.org]
[DOI]
(P p)
