Difference between revisions of "PbpE"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34440&redirect=T BSU34440]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pbpE-racX.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pbpE-racX.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34440&redirect=T BSU34440]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3TG9 3TG9] (from ''Bacillus halodurans'', 27% identity, 59% similarity)
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3TG9 3TG9] (from ''Bacillus halodurans'', 27% identity, 59% similarity)

Revision as of 14:50, 2 April 2014

Gene name pbpE
Synonyms
Essential no
Product penicillin-binding protein PBP 4* (spore cortex)
Function endopeptidase
Gene expression levels in SubtiExpress: pbpE
MW, pI 51 kDa, 4.835
Gene length, protein length 1353 bp, 451 aa
Immediate neighbours racX, sacB
Sequences Protein DNA DNA_with_flanks
Genetic context
PbpE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PbpE expression.png















Categories containing this gene/protein

cell wall synthesis, cell wall degradation/ turnover, cell envelope stress proteins (controlled by SigM, V, W, X, Y), most abundant proteins

This gene is a member of the following regulons

SigW regulon

The gene

Basic information

  • Locus tag: BSU34440

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: beta-lactamase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure: 3TG9 (from Bacillus halodurans, 27% identity, 59% similarity)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References