Difference between revisions of "Dat"
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU09670&redirect=T BSU09670] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU09670&redirect=T BSU09670] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1G2W 1G2W] (E177S Mutant, Geobacillus stearothermophilus, 43% identity) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1G2W 1G2W] (E177S Mutant, Geobacillus stearothermophilus, 43% identity) |
Revision as of 13:18, 2 April 2014
- Description: D-alanine aminotransferase
Gene name | dat |
Synonyms | yheM |
Essential | no |
Product | D-alanine aminotransferase |
Function | peptidoglycan precursor biosynthesis |
Gene expression levels in SubtiExpress: dat | |
Metabolic function and regulation of this protein in SubtiPathways: dat | |
MW, pI | 31 kDa, 4.871 |
Gene length, protein length | 846 bp, 282 aa |
Immediate neighbours | yheN, nhaC |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall synthesis, biosynthesis of cell wall components
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09670
Phenotypes of a mutant
Database entries
- BsubCyc: BSU09670
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
- Another gene coding for O6-methylguanine DNA alkyltransferase was formely known as dat, it is now called ogt
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-alanine + 2-oxoglutarate = pyruvate + D-glutamate (according to Swiss-Prot)
- Protein family: class-IV pyridoxal-phosphate-dependent aminotransferase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU09670
- Structure: 1G2W (E177S Mutant, Geobacillus stearothermophilus, 43% identity)
- UniProt: O07597
- KEGG entry: [2]
- E.C. number: 2.6.1.21
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References