Difference between revisions of "GerBB"

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(The protein)
(Basic information/ Evolution)
Line 73: Line 73:
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
** amino acid, polyamine, organocation (APC) family of transporters, [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3]
+
* '''Protein family:'''
 +
** [[APC superfamily of transport proteins|amino acid, polyamine, organocation (APC) superfamily of transporters]], [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3]
  
 
* '''Paralogous protein(s):''' [[GerAB]], [[GerKB]], [[YndE]]
 
* '''Paralogous protein(s):''' [[GerAB]], [[GerKB]], [[YndE]]

Revision as of 18:43, 28 November 2013

  • Description: nutrient receptor, germination response to the combination of glucose, fructose, and KCl

Gene name gerBB
Synonyms
Essential no
Product nutrient receptor
Function germination
Gene expression levels in SubtiExpress: gerBB
Interactions involving this protein in SubtInteract: GerBB
MW, pI 41 kDa, 9.889
Gene length, protein length 1104 bp, 368 aa
Immediate neighbours gerBA, gerBC
Sequences Protein DNA DNA_with_flanks
Genetic context
GerBB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GerBB expression.png















Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU35810

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed