Difference between revisions of "YndF"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yndE]]'', ''[[yndG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yndE]]'', ''[[yndG]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU17770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU17770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU17770 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU17770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU17770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU17770 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yndF_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yndF_context.gif]]

Revision as of 10:20, 14 May 2013

  • Description: part of the YndD-YndE-YndF germinant receptor of unknown specificity

Gene name yndF
Synonyms
Essential no
Product part of the YndD-YndE-YndF germinant receptor
Function germination
Gene expression levels in SubtiExpress: yndF
MW, pI 44 kDa, 7.263
Gene length, protein length 1212 bp, 404 aa
Immediate neighbours yndE, yndG
Sequences Protein DNA DNA_with_flanks
Genetic context
File:YndF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YndF expression.png















Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU17770

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerABKC lipoprotein family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References