Difference between revisions of "SleB"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[germination]]}} | + | {{SubtiWiki category|[[germination]]}}, |
| + | {{SubtiWiki category|[[membrane proteins]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
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* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
| + | ** outer surface of the inner spore membrane {{PubMed|23335419}} | ||
=== Database entries === | === Database entries === | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sleB_2399152_2400069_-1 sleB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sleB_2399152_2400069_-1 sleB] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigG]] {{PubMed|15699190,10197998}} | + | * '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190,10197998}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
| − | <pubmed>16905870,16707666,10197998 , 20435722 </pubmed> | + | <pubmed>16905870,16707666,10197998 , 20435722 23335419</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:19, 25 January 2013
- Description: spore cortex-lytic enzyme
| Gene name | sleB |
| Synonyms | ypeA |
| Essential | no |
| Product | spore cortex-lytic enzyme |
| Function | degration of the spore cortex, germination |
| Gene expression levels in SubtiExpress: sleB | |
| MW, pI | 33 kDa, 9.506 |
| Gene length, protein length | 915 bp, 305 aa |
| Immediate neighbours | ypeB, prsW |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU22930
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: sleB family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- outer surface of the inner spore membrane PubMed
Database entries
- Structure:
- UniProt: P50739
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
George Korza, Peter Setlow
Topology and accessibility of germination proteins in the Bacillus subtilis spore inner membrane.
J Bacteriol: 2013, 195(7);1484-91
[PubMed:23335419]
[WorldCat.org]
[DOI]
(I p)
Xuan Yi, Peter Setlow
Studies of the commitment step in the germination of spores of bacillus species.
J Bacteriol: 2010, 192(13);3424-33
[PubMed:20435722]
[WorldCat.org]
[DOI]
(I p)
Atsushi Masayama, Hideyuki Fukuoka, Shiro Kato, Tohru Yoshimura, Michie Moriyama, Ryuichi Moriyama
Subcellular localization of a germiantion-specific cortex-lytic enzyme, SleB, of Bacilli during sporulation.
Genes Genet Syst: 2006, 81(3);163-9
[PubMed:16905870]
[WorldCat.org]
[DOI]
(P p)
Barbara Setlow, Swaroopa Atluri, Ryan Kitchel, Kasia Koziol-Dube, Peter Setlow
Role of dipicolinic acid in resistance and stability of spores of Bacillus subtilis with or without DNA-protective alpha/beta-type small acid-soluble proteins.
J Bacteriol: 2006, 188(11);3740-7
[PubMed:16707666]
[WorldCat.org]
[DOI]
(P p)
R Moriyama, H Fukuoka, S Miyata, S Kudoh, A Hattori, S Kozuka, Y Yasuda, K Tochikubo, S Makino
Expression of a germination-specific amidase, SleB, of Bacilli in the forespore compartment of sporulating cells and its localization on the exterior side of the cortex in dormant spores.
J Bacteriol: 1999, 181(8);2373-8
[PubMed:10197998]
[WorldCat.org]
[DOI]
(P p)
