Difference between revisions of "Gdh"
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|style="background:#ABCDEF;" align="center"|'''Function''' || germination | |style="background:#ABCDEF;" align="center"|'''Function''' || germination | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03930 gdh] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 5.082 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 5.082 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[glcU]]'', ''[[ycnI]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[glcU]]'', ''[[ycnI]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03930 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03930 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03930 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:gdh_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:gdh_context.gif]] | ||
Revision as of 12:09, 13 May 2013
- Description: glucose 1-dehydrogenase (NAD)
| Gene name | gdh |
| Synonyms | |
| Essential | no |
| Product | glucose 1-dehydrogenase (NAD) |
| Function | germination |
| Gene expression levels in SubtiExpress: gdh | |
| MW, pI | 27 kDa, 5.082 |
| Gene length, protein length | 783 bp, 261 aa |
| Immediate neighbours | glcU, ycnI |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03930
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H (according to Swiss-Prot)
- Protein family: short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P12310
- KEGG entry: [3]
- E.C. number: 1.1.1.47
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
I Bagyan, J Hobot, S Cutting
A compartmentalized regulator of developmental gene expression in Bacillus subtilis.
J Bacteriol: 1996, 178(15);4500-7
[PubMed:8755877]
[WorldCat.org]
[DOI]
(P p)
Y Nakatani, W L Nicholson, K D Neitzke, P Setlow, E Freese
Sigma-G RNA polymerase controls forespore-specific expression of the glucose dehydrogenase operon in Bacillus subtilis.
Nucleic Acids Res: 1989, 17(3);999-1017
[PubMed:2493633]
[WorldCat.org]
[DOI]
(P p)
P N Rather, C P Moran
Compartment-specific transcription in Bacillus subtilis: identification of the promoter for gdh.
J Bacteriol: 1988, 170(11);5086-92
[PubMed:3141376]
[WorldCat.org]
[DOI]
(P p)
Y Fujita, R Ramaley, E Freese
Location and properties of glucose dehydrogenase in sporulating cells and spores of Bacillus subtilis.
J Bacteriol: 1977, 132(1);282-93
[PubMed:21162]
[WorldCat.org]
[DOI]
(P p)
