Difference between revisions of "BsdA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of resistance to salicylic acid | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of resistance to salicylic acid | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03620 bsdA] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 5.99 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 5.99 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[tcyA]]'', ''[[bsdB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[tcyA]]'', ''[[bsdB]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03620 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03620 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03620 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yclA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yclA_context.gif]] | ||
Revision as of 12:08, 13 May 2013
| Gene name | bsdA |
| Synonyms | yclA |
| Essential | no |
| Product | transcriptional activator (LysR family) |
| Function | regulation of resistance to salicylic acid |
| Gene expression levels in SubtiExpress: bsdA | |
| MW, pI | 32 kDa, 5.99 |
| Gene length, protein length | 870 bp, 290 aa |
| Immediate neighbours | tcyA, bsdB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transcription factors and their control, resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The BsdA regulon:
The gene
Basic information
- Locus tag: BSU03620
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcriptional activation of the bsdB-bsdC-bsdD operon in response to salicylic acid
- Protein family: LysR family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P94403
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Nguyen Van Duy, Ulrike Mäder, Ngoc Phuong Tran, Jean-François Cavin, Le Thi Tam, Dirk Albrecht, Michael Hecker, Haike Antelmann
The proteome and transcriptome analysis of Bacillus subtilis in response to salicylic acid.
Proteomics: 2007, 7(5);698-710
[PubMed:17295427]
[WorldCat.org]
[DOI]
(P p)
