Difference between revisions of "GerD"
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− | + | * '''Description:''' required for clustering of germinant receptors in the spore inner membrane<br/><br/> | |
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] | |style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] | ||
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GerD GerD] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GerD GerD] | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:gerD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:gerD_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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__TOC__ | __TOC__ | ||
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* '''Operon:''' [[gerD]] {{PubMed|2517635}} | * '''Operon:''' [[gerD]] {{PubMed|2517635}} | ||
− | * | + | * '''[[Sigma factor]]:''' [[SigF]] {{PubMed|15699190}}, [[SigG]] {{PubMed|1906867,15699190}} |
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* '''Regulation:''' | * '''Regulation:''' |
Revision as of 09:26, 7 August 2012
- Description: required for clustering of germinant receptors in the spore inner membrane
Gene name | gerD |
Synonyms | |
Essential | no |
Product | lipoprotein |
Function | germination |
Interactions involving this protein in SubtInteract: GerD | |
MW, pI | 20 kDa, 4.862 |
Gene length, protein length | 555 bp, 185 aa |
Immediate neighbours | salA, kbaA |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU01550
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: required for clustering of germinant receptors in the spore inner membrane PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P16450
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- expression level depends on sporulation conditions (medim composition, temperature) PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody: available in Anne Moir lab
Labs working on this gene/protein
Anne Moir, University of Sheffield, UK
Your additional remarks
References
Additional references: PubMed