Difference between revisions of "SpoIIAB"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[dacF]]-[[spoIIAA]]-[[spoIIAB]]-[[sigF]]''
 +
''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]''
  
* '''Sigma factor:'''  
+
* '''Sigma factor:''' ''[[dacF]]'': [[SigF]], [[SigG]]
 +
''[[spoIIA]]'': [[SigH]]
  
* '''Regulation:'''  
+
* '''Regulation:''' ''[[dacF]]'': expressed during sporulation, ''[[spoIIAA]]'': expressed early during sporulation
  
* '''Regulatory mechanism:'''  
+
* '''Regulatory mechanism:''' ''[[spoIIAA]]'': activated by [[Spo0A]] and repressed by [[SinR]]
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 08:23, 12 February 2009

  • Description: write here

Gene name spoIIAB
Synonyms
Essential no
Product anti-sigma factor (antagonist of sigma-F) and serine kinase
Function binding to sigma-F (SpoIIAC) in the presence of ATP before septation; phosphorylation and inactivation of SpoIIAA
MW, pI 16 kDa, 4.383
Gene length, protein length 438 bp, 146 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
SpoIIAB context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

spoIIAA-spoIIAB-sigF

spoIIA: SigH

  • Regulation: dacF: expressed during sporulation, spoIIAA: expressed early during sporulation
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed