Difference between revisions of "NhaC"

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* '''Operon:''' ''[[nhaC]]'' {{PubMed|21815947}}
 
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* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=nhaC_1042885_1044246_-1 nhaC] {{PubMed|22383849}}
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Revision as of 16:57, 12 April 2012

  • Description: Na+/H+ antiporter

Gene name nhaC
Synonyms yheL
Essential no
Product Na+/H+ antiporter
Function pH homeostasis
MW, pI 47 kDa, 7.874
Gene length, protein length 1359 bp, 453 aa
Immediate neighbours dat, nhaX
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
NhaC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transporters/ other, metal ion homeostasis (K, Na, Ca, Mg), pH homeostasis, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU09680

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: nhaC Na(+)/H(+) antiporter family (according to Swiss-Prot)
  • Paralogous protein(s): MleN

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
    • NhaX: transcription activation (probably) PubMed
  • Additional information:
    • the mRNA is substantially stabilized upon depletion of RNase Y PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J  
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. 
Mol Microbiol. 2011 81(6): 1459-1473. 
PubMed:21815947