Difference between revisions of "S-box Element"
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The S-box element is a [[riboswitch]] that controls different genes of sulphur metabolism in response to the presence of S-adenosylmethionine. | The S-box element is a [[riboswitch]] that controls different genes of sulphur metabolism in response to the presence of S-adenosylmethionine. | ||
* Upon binding of SAM, the [[riboswitch]] adopts a terminator structure resulting in transcription termination. | * Upon binding of SAM, the [[riboswitch]] adopts a terminator structure resulting in transcription termination. | ||
| − | * In the | + | * In the absence of SAM, the [[riboswitch]] has the antitermination structure that allows transcription elongation into the controlled gene/ operon. |
| + | * S-box riboswitch turnover is initiated by [[rny |RNase Y]] {{PubMed|19779461}} | ||
| − | Genes controlled by S-box | + | ==Genes controlled by a S-box== |
* ''[[cysH]]-[[cysP]]-[[sat]]-[[cysC]]-[[ylnD]]-[[ylnE]]-[[ylnF]]'' | * ''[[cysH]]-[[cysP]]-[[sat]]-[[cysC]]-[[ylnD]]-[[ylnE]]-[[ylnF]]'' | ||
* ''[[metE]]'' | * ''[[metE]]'' | ||
| + | * ''[[metI]]''-''[[metC]]'' | ||
* ''[[metK]]'' | * ''[[metK]]'' | ||
| + | * ''[[metN]]-[[metP]]-[[metQ]]'' | ||
| + | * ''[[mtnK]]-[[mtnA]]'' | ||
| + | * ''[[mtnW]]-[[mtnX]]-[[mtnB]]-[[mtnD]]'' | ||
* ''[[yitJ]]-[[yitI]]-[[yitH]]'' | * ''[[yitJ]]-[[yitI]]-[[yitH]]'' | ||
| − | * ''[[ | + | * ''[[yoaD]]-[[yoaC]]-[[yoaB]]'' |
| − | |||
| − | |||
| − | |||
| − | |||
* ''[[yxjG]]'' | * ''[[yxjG]]'' | ||
* ''[[yxjH]]'' | * ''[[yxjH]]'' | ||
==References== | ==References== | ||
| + | <pubmed> 18039762,12626738 ,17381302 19779461 12787499 18039762 18443629 20951706 22543867 28701520</pubmed> | ||
| + | |||
| + | =See also:= | ||
| + | * [[RNA switch]] | ||
| − | + | =Back to [[regulons]]= | |
Latest revision as of 09:03, 14 July 2017
The S-box element is a riboswitch that controls different genes of sulphur metabolism in response to the presence of S-adenosylmethionine.
- Upon binding of SAM, the riboswitch adopts a terminator structure resulting in transcription termination.
- In the absence of SAM, the riboswitch has the antitermination structure that allows transcription elongation into the controlled gene/ operon.
- S-box riboswitch turnover is initiated by RNase Y PubMed
Genes controlled by a S-box
- cysH-cysP-sat-cysC-ylnD-ylnE-ylnF
- metE
- metI-metC
- metK
- metN-metP-metQ
- mtnK-mtnA
- mtnW-mtnX-mtnB-mtnD
- yitJ-yitI-yitH
- yoaD-yoaC-yoaB
- yxjG
- yxjH
References
