Difference between revisions of "SP-beta prophage"

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(Created page with "{{CategoryTree |Parents= * 5. Prophages and mobile genetic elements ** 5.1. Prophages |Neighbours= * 5.1.1. PBSX prophage * 5.1.2. SPß prophage * 5.1.3. Skin element...")
 
(→‎Key publications)
 
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{{CategoryTree
 
{{CategoryTree
 
|Parents=
 
|Parents=
−
* 5. Prophages and mobile genetic elements
+
* 5. [[Prophages and mobile genetic elements]]
−
** 5.1. Prophages
+
** 5.1. [[Prophages]]
 
|Neighbours=
 
|Neighbours=
 
* 5.1.1. [[PBSX prophage]]
 
* 5.1.1. [[PBSX prophage]]
 
* 5.1.2. [[SPß prophage]]
 
* 5.1.2. [[SPß prophage]]
 
* 5.1.3. [[Skin element]]
 
* 5.1.3. [[Skin element]]
−
* 5.1.4. [[Phage-related functions]]
+
* 5.1.4. [[Prophage 1]]
 +
* 5.1.5. [[Prophage 3]]
 +
* 5.1.6. [[Phage-related functions]]
 
|Related=
 
|Related=
 
none  
 
none  
 
|}}
 
|}}
 +
 +
== Important notes==
 +
* In 168, SP-beta disrupts the ''[[ypqP]]'' gene
 +
* A strain devoid of [[PBSX prophage]] , [[SP-beta prophage]] and the [[Skin element]] (TF8A) as well as a strain devoid of all six prophages of the 168 genome (D6) is available in [[Jan Maarten van Dijl]]'s lab {{PubMed|12949151}}
 +
 +
== Genes in this functional category ==
 +
* ''[[as-yonT]]''
 +
* ''[[bdbA]]''
 +
* ''[[bdbB]]''
 +
* ''[[bhlA]]''
 +
* ''[[bhlB]]''
 +
* ''[[blyA]]''
 +
* ''[[bsrG]]''
 +
* ''[[cwlP]]''
 +
* ''[[ligB]]''
 +
* ''[[mtbP]]''
 +
* ''[[nonA]]''
 +
* ''[[nrdEB]]''
 +
* ''[[pghZ]]''
 +
* ''[[sprA]]''
 +
* ''[[sprB]]''
 +
* ''[[SR4]]''
 +
* ''[[sspC]]''
 +
* ''[[sunA]]''
 +
* ''[[sunI]]''
 +
* ''[[sunS]]''
 +
* ''[[sunT]]''
 +
* ''[[uvrX]]''
 +
* ''[[yojW]]''
 +
* ''[[yokB]]''
 +
* ''[[yokC]]''
 +
* ''[[yokD]]''
 +
* ''[[yokE]]''
 +
* ''[[yokF]]''
 +
* ''[[yokG]]''
 +
* ''[[yokH]]''
 +
* ''[[yokI]]''
 +
* ''[[yokJ]]''
 +
* ''[[yokK]]''
 +
* ''[[yokL]]''
 +
* ''[[yolA]]''
 +
* ''[[yolB]]''
 +
* ''[[yolC]]''
 +
* ''[[yolD]]''
 +
* ''[[yomD]]''
 +
* ''[[yomE]]''
 +
* ''[[yomF]]''
 +
* ''[[yomG]]''
 +
* ''[[yomH]]''
 +
* ''[[yomJ]]''
 +
* ''[[yomK]]''
 +
* ''[[yomL]]''
 +
* ''[[yomM]]''
 +
* ''[[yomN]]''
 +
* ''[[yomO]]''
 +
* ''[[yomP]]''
 +
* ''[[yomQ]]''
 +
* ''[[yomR]]''
 +
* ''[[yomS]]''
 +
* ''[[yomT]]''
 +
* ''[[yomU]]''
 +
* ''[[yomV]]''
 +
* ''[[yomW]]''
 +
* ''[[yomX]]''
 +
* ''[[yomY]]''
 +
* ''[[yomZ]]''
 +
* ''[[yonA]]''
 +
* ''[[yonB]]''
 +
* ''[[yonC]]''
 +
* ''[[yonD]]''
 +
* ''[[yonE]]''
 +
* ''[[yonF]]''
 +
* ''[[yonG]]''
 +
* ''[[yonH]]''
 +
* ''[[yonI]]''
 +
* ''[[yonJ]]''
 +
* ''[[yonK]]''
 +
* ''[[yonN]]''
 +
* ''[[yonO]]''
 +
* ''[[yonP]]''
 +
* ''[[yonR]]''
 +
* ''[[yonS]]''
 +
* ''[[yonT]]''
 +
* ''[[yonU]]''
 +
* ''[[yonV]]''
 +
* ''[[yonX]]''
 +
* ''[[yopA]]''
 +
* ''[[yopB]]''
 +
* ''[[yopC]]''
 +
* ''[[yopD]]''
 +
* ''[[yopE]]''
 +
* ''[[yopF]]''
 +
* ''[[yopG]]''
 +
* ''[[yopH]]''
 +
* ''[[yopI]]''
 +
* ''[[yopJ]]''
 +
* ''[[yopK]]''
 +
* ''[[yopL]]''
 +
* ''[[yopM]]''
 +
* ''[[yopN]]''
 +
* ''[[yopO]]''
 +
* ''[[yopP]]''
 +
* ''[[yopQ]]''
 +
* ''[[yopR]]''
 +
* ''[[yopS]]''
 +
* ''[[yopT]]''
 +
* ''[[yopU]]''
 +
* ''[[yopV]]''
 +
* ''[[yopW]]''
 +
* ''[[yopX]]''
 +
* ''[[yopY]]''
 +
* ''[[yopZ]]''
 +
* ''[[yoqA]]''
 +
* ''[[yoqB]]''
 +
* ''[[yoqC]]''
 +
* ''[[yoqD]]''
 +
* ''[[yoqE]]''
 +
* ''[[yoqF]]''
 +
* ''[[yoqG]]''
 +
* ''[[yoqH]]''
 +
* ''[[yoqI]]''
 +
* ''[[yoqJ]]''
 +
* ''[[yoqK]]''
 +
* ''[[yoqL]]''
 +
* ''[[yoqM]]''
 +
* ''[[yoqN]]''
 +
* ''[[yoqO]]''
 +
* ''[[yoqP]]''
 +
* ''[[yoqR]]''
 +
* ''[[yoqS]]''
 +
* ''[[yoqT]]''
 +
* ''[[yoqU]]''
 +
* ''[[yoqW]]''
 +
* ''[[yoqX]]''
 +
* ''[[yoqY]]''
 +
 +
* ''[[yorA]]''
 +
* ''[[yorB]]''
 +
* ''[[yorC]]''
 +
* ''[[yorD]]''
 +
* ''[[yorE]]''
 +
* ''[[yorF]]''
 +
* ''[[yorG]]''
 +
* ''[[yorH]]''
 +
* ''[[yorI]]''
 +
* ''[[yorJ]]''
 +
* ''[[yorK]]''
 +
* ''[[yorL]]''
 +
* ''[[yorM]]''
 +
* ''[[yorN]]''
 +
* ''[[yorO]]''
 +
* ''[[yorP]]''
 +
* ''[[yorQ]]''
 +
* ''[[yorR]]''
 +
* ''[[yorS]]''
 +
* ''[[yorT]]''
 +
* ''[[yorV]]''
 +
* ''[[yorW]]''
 +
* ''[[yorX]]''
 +
* ''[[yorY]]''
 +
* ''[[yorZ]]''
 +
* ''[[yosA]]''
 +
* ''[[yosB]]''
 +
* ''[[yosC]]''
 +
* ''[[yosD]]''
 +
* ''[[yosE]]''
 +
* ''[[yosF]]''
 +
* ''[[yosG]]''
 +
* ''[[yosH]]''
 +
* ''[[yosI]]''
 +
* ''[[yosJ]]''
 +
* ''[[yosK]]''
 +
* ''[[yosL]]''
 +
* ''[[yosM]]''
 +
* ''[[yosP]]''
 +
* ''[[yosQ]]''
 +
* ''[[yosR]]''
 +
* ''[[yosS]]''
 +
* ''[[yosT]]''
 +
* ''[[yosU]]''
 +
* ''[[yosV]]''
 +
* ''[[yosW]]''
 +
* ''[[yosX]]''
 +
* ''[[yotB]]''
 +
* ''[[yotC]]''
 +
* ''[[yotD]]''
 +
* ''[[yotE]]''
 +
* ''[[yotF]]''
 +
* ''[[yotG]]''
 +
* ''[[yotH]]''
 +
* ''[[yotI]]''
 +
* ''[[yotJ]]''
 +
* ''[[yotK]]''
 +
* ''[[yotL]]''
 +
* ''[[yotM]]''
 +
* ''[[youA]]''
 +
* ''[[youB]]''
 +
* ''[[yoyH]]''
 +
* ''[[yoyI]]''
 +
* ''[[yoyJ]]''
 +
* ''[[yoyK/1]]''
 +
* ''[[yoyK/2]]''
 +
* ''[[yozP]]''
 +
 +
==Key publications==
 +
<pubmed> 9781889 10376821 12949151 34100162 </pubmed>
 +
 +
=Back to [[categories]]=

Latest revision as of 09:20, 17 June 2021

Parent categories
Neighbouring categories
Related categories

none

Important notes

Genes in this functional category

Key publications

Katharina Kohm, Robert Hertel
The life cycle of SPβ and related phages.
Arch Virol: 2021, 166(8);2119-2130
[PubMed:34100162] [WorldCat.org] [DOI] (I p)

Helga Westers, Ronald Dorenbos, Jan Maarten van Dijl, Jorrit Kabel, Tony Flanagan, Kevin M Devine, Florence Jude, Simone J Seror, Aaron C Beekman, Elise Darmon, Caroline Eschevins, Anne de Jong, Sierd Bron, Oscar P Kuipers, Alessandra M Albertini, Haike Antelmann, Michael Hecker, Nicola Zamboni, Uwe Sauer, Claude Bruand, Dusko S Ehrlich, Juan C Alonso, Margarita Salas, Wim J Quax
Genome engineering reveals large dispensable regions in Bacillus subtilis.
Mol Biol Evol: 2003, 20(12);2076-90
[PubMed:12949151] [WorldCat.org] [DOI] (P p)

Vladimir Lazarevic, Andreas Düsterhöft, Blazenka Soldo, Helmut Hilbert, Catherine Mauël, Dimitri Karamata
Nucleotide sequence of the Bacillus subtilis temperate bacteriophage SPbetac2.
Microbiology (Reading): 1999, 145 ( Pt 5);1055-1067
[PubMed:10376821] [WorldCat.org] [DOI] (P p)

V Lazarevic
Is there a relic of a spliceosomal intron in Bacillus subtilis temperate phage SPbeta?
Mol Microbiol: 1998, 29(6);1523-6
[PubMed:9781889] [WorldCat.org] (P p)


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