Difference between revisions of "DegV"
| Line 56: | Line 56: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35480&redirect=T BSU35480] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yviA.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yviA.html] | ||
| Line 93: | Line 94: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35480&redirect=T BSU35480] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/search/structidSearch.do?structureId=3FYS 3FYS] | * '''Structure:''' [http://www.rcsb.org/pdb/search/structidSearch.do?structureId=3FYS 3FYS] | ||
Revision as of 14:56, 2 April 2014
- Description: fatty acid binding protein
| Gene name | degV |
| Synonyms | yviA, sacU |
| Essential | no |
| Product | fatty acid binding protein |
| Function | unknown |
| Gene expression levels in SubtiExpress: degV | |
| MW, pI | 31 kDa, 5.227 |
| Gene length, protein length | 843 bp, 281 aa |
| Immediate neighbours | comFA, degU |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35480
Phenotypes of a mutant
Database entries
- BsubCyc: BSU35480
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Diphosphate + H2O = 2 phosphate (according to Swiss-Prot)
- Protein family: UPF0230 (degV) family (according to Swiss-Prot) PpaX family (according to Swiss-Prot)
- Paralogous protein(s): YitS
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU35480
- Structure: 3FYS
- UniProt: P32436
- KEGG entry: [3]
- E.C. number: 3.6.1.1
Additional information
Expression and regulation
- Operon: degV PubMed
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
