Difference between revisions of "SdpA"

From SubtiWiki
Jump to: navigation, search
Line 54: Line 54:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU33750&redirect=T BSU33750]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sdp.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sdp.html]
Line 92: Line 93:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU33750&redirect=T BSU33750]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 14:46, 2 April 2014

  • Description: required for SdpC toxin maturation

Gene name sdpA
Synonyms yvaW
Essential no
Product unknown
Function maturation of the SdpC toxin
Gene expression levels in SubtiExpress: sdpA
MW, pI 18 kDa, 9.766
Gene length, protein length 474 bp, 158 aa
Immediate neighbours yvaV, sdpB
Sequences Protein DNA DNA_with_flanks
Genetic context
YvaW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SdpA expression.png















Categories containing this gene/protein

toxins, antitoxins and immunity against toxins

This gene is a member of the following regulons

AbrB regulon, Rok regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU33750

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: repressed by glucose (8-fold) PubMed
  • Additional information:
    • the amount of the mRNA is substantially decreased upon depletion of RNase Y PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original Publications