Difference between revisions of "SpoVAD"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23410&redirect=T BSU23410]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/spoVAABCDEF-lysA.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/spoVAABCDEF-lysA.html]
Line 94: Line 95:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23410&redirect=T BSU23410]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3LM6 3LM6]
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3LM6 3LM6]

Revision as of 14:07, 2 April 2014

  • Description: essential for the uptake of the 1:1 chelate of pyridine-2,6-dicarboxylic acid (DPA(2,6)) and Ca(2+) into developing spores, likely germination protein

Gene name spoVAD
Synonyms
Essential no
Product binding protein for DPA
Function likely germination protein
Gene expression levels in SubtiExpress: spoVAD
Metabolic function and regulation of this protein in SubtiPathways:
spoVAD
MW, pI 35 kDa, 5.243
Gene length, protein length 1014 bp, 338 aa
Immediate neighbours spoVAEB, spoVAC
Sequences Protein DNA DNA_with_flanks
Genetic context
SpoVAD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoVAD expression.png















Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigG regulon, SpoVT regulon

The gene

Basic information

  • Locus tag: BSU23410

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

  • 6,500 molecules are present per spore PubMed

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • 6,500 molecules are present per spore PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References